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Cluster: HRGMv2_0258_CGC120

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0258_42 HRGMv2_0258_42_12 8534 12394 - GH31_18
TC HRGMv2_0258_42 HRGMv2_0258_42_13 12502 14199 - 8.A.59.2.1
pfam HRGMv2_0258_42 HRGMv2_0258_42_14 14353 15534 + VWA
STP HRGMv2_0258_42 HRGMv2_0258_42_15 16110 18161 - HATPase_c
TC HRGMv2_0258_42 HRGMv2_0258_42_16 18273 20834 - 3.A.9.1.2
pfam HRGMv2_0258_42 HRGMv2_0258_42_17 21056 23632 + DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C | DNA_gyraseA_C
pfam HRGMv2_0258_42 HRGMv2_0258_42_18 23673 24893 + TPR_8 | TPR_16 | TPR_16
TC HRGMv2_0258_42 HRGMv2_0258_42_19 24996 26210 - 3.B.1.1.4
Gene ID: HRGMv2_0258_42_12
Type: CAZyme
Location: 8534 - 12394 (-)
Gene ID: HRGMv2_0258_42_13
Type: TC
Location: 12502 - 14199 (-)
Gene ID: HRGMv2_0258_42_14
Type: pfam
Location: 14353 - 15534 (+)
Gene ID: HRGMv2_0258_42_15
Type: STP
Location: 16110 - 18161 (-)
Gene ID: HRGMv2_0258_42_16
Type: TC
Location: 18273 - 20834 (-)
Gene ID: HRGMv2_0258_42_17
Type: pfam
Location: 21056 - 23632 (+)
Gene ID: HRGMv2_0258_42_18
Type: pfam
Location: 23673 - 24893 (+)
Gene ID: HRGMv2_0258_42_19
Type: TC
Location: 24996 - 26210 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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