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Genome Details

Selected Rep_genome_ID: HRGMv2_0223
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella absiana
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0223 3,248,629 99.32% 0.844% Japan Asia HRGM
Rep_248 2,915,412 98.6674% 0.844595% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0223_CGC34 CGCFAM_00001 Yes 5 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0223_CGC46 CGCFAM_00005 Yes 6 3
HRGMv2_0223_CGC14 CGCFAM_00031 Yes 5 2 pectin/galactan
HRGMv2_0223_CGC24 CGCFAM_00034 Yes 7 4
HRGMv2_0223_CGC2 CGCFAM_00043 Yes 8 2 alpha-glucan
HRGMv2_0223_CGC9 CGCFAM_00116 Yes 14 2 xylan/beta-glucan
HRGMv2_0223_CGC17 CGCFAM_00146 Yes 3 2
HRGMv2_0223_CGC27 CGCFAM_00180 Yes 9 4
HRGMv2_0223_CGC38 CGCFAM_00468 Yes 5 1
HRGMv2_0223_CGC6 CGCFAM_00610 Yes 4 1
HRGMv2_0223_CGC39 CGCFAM_00721 Yes 4 1
HRGMv2_0223_CGC19 CGCFAM_01072 Yes 8 3
HRGMv2_0223_CGC11 CGCFAM_01143 Yes 7 3
HRGMv2_0223_CGC1 CGCFAM_01143 Yes 9 3
HRGMv2_0223_CGC42 CGCFAM_01484 Yes 6 4
HRGMv2_0223_CGC3 CGCFAM_02470 Yes 5 3
HRGMv2_0223_CGC49 CGCFAM_02471 Yes 6 1
HRGMv2_0223_CGC44 CGCFAM_02472 Yes 10 4
HRGMv2_0223_CGC31 CGCFAM_02505 Yes 5 1
HRGMv2_0223_CGC22 CGCFAM_03065 Yes 5 2
HRGMv2_0223_CGC5 CGCFAM_03186 Yes 8 2
HRGMv2_0223_CGC35 CGCFAM_03187 Yes 7 1
Top CAZyme Families