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Cluster: HRGMv2_0223_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0223_33 HRGMv2_0223_33_45 61238 64474 + 1.B.14.6.1
TC HRGMv2_0223_33 HRGMv2_0223_33_46 64498 66132 + 8.A.46.1.1
CAZyme HRGMv2_0223_33 HRGMv2_0223_33_47 66419 68878 + GH31_4
NULL(UNKNOWN) HRGMv2_0223_33 HRGMv2_0223_33_48 68902 69036 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0223_33 HRGMv2_0223_33_49 69165 70292 - GH43_24
CAZyme HRGMv2_0223_33 HRGMv2_0223_33_50 70477 71421 - CBM32
pfam HRGMv2_0223_33 HRGMv2_0223_33_51 71421 73112 - SusD_RagB | SusD-like_3
TC HRGMv2_0223_33 HRGMv2_0223_33_52 73134 75932 - 1.B.14.6.1
Gene ID: HRGMv2_0223_33_45
Type: TC
Location: 61238 - 64474 (+)
Gene ID: HRGMv2_0223_33_46
Type: TC
Location: 64498 - 66132 (+)
Gene ID: HRGMv2_0223_33_47
Type: CAZyme
Location: 66419 - 68878 (+)
Gene ID: HRGMv2_0223_33_48
Type:
Location: 68902 - 69036 (-)
Gene ID: HRGMv2_0223_33_49
Type: CAZyme
Location: 69165 - 70292 (-)
Gene ID: HRGMv2_0223_33_50
Type: CAZyme
Location: 70477 - 71421 (-)
Gene ID: HRGMv2_0223_33_51
Type: pfam
Location: 71421 - 73112 (-)
Gene ID: HRGMv2_0223_33_52
Type: TC
Location: 73134 - 75932 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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