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Cluster: HRGMv2_0223_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0223_7 HRGMv2_0223_7_15 24113 25531 - 2.A.21.5.3
CAZyme HRGMv2_0223_7 HRGMv2_0223_7_16 25738 27885 - GH97
CAZyme HRGMv2_0223_7 HRGMv2_0223_7_17 27964 29742 - GH66
pfam HRGMv2_0223_7 HRGMv2_0223_7_18 29790 31286 - SusE | SusF_SusE | SusF_SusE
TC HRGMv2_0223_7 HRGMv2_0223_7_19 31326 32816 - 8.A.46.1.3
TC HRGMv2_0223_7 HRGMv2_0223_7_20 32825 35827 - 1.B.14.6.1
pfam HRGMv2_0223_7 HRGMv2_0223_7_21 36057 37730 - DUF6377
TC HRGMv2_0223_7 HRGMv2_0223_7_22 37735 39477 - 9.B.174.1.1
Gene ID: HRGMv2_0223_7_15
Type: TC
Location: 24113 - 25531 (-)
Gene ID: HRGMv2_0223_7_16
Type: CAZyme
Location: 25738 - 27885 (-)
Gene ID: HRGMv2_0223_7_17
Type: CAZyme
Location: 27964 - 29742 (-)
Gene ID: HRGMv2_0223_7_18
Type: pfam
Location: 29790 - 31286 (-)
Gene ID: HRGMv2_0223_7_19
Type: TC
Location: 31326 - 32816 (-)
Gene ID: HRGMv2_0223_7_20
Type: TC
Location: 32825 - 35827 (-)
Gene ID: HRGMv2_0223_7_21
Type: pfam
Location: 36057 - 37730 (-)
Gene ID: HRGMv2_0223_7_22
Type: TC
Location: 37735 - 39477 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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