dbCAN Logo

Cluster: HRGMv2_0223_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0223_37 HRGMv2_0223_37_34 43184 44494 + 2.A.2.6.2
TC HRGMv2_0223_37 HRGMv2_0223_37_35 44542 45114 + 9.B.196.1.2
CAZyme HRGMv2_0223_37 HRGMv2_0223_37_36 45338 48034 + GH77
CAZyme HRGMv2_0223_37 HRGMv2_0223_37_37 48169 50313 + GH97
CAZyme HRGMv2_0223_37 HRGMv2_0223_37_38 50415 52316 + GH13_14
CAZyme HRGMv2_0223_37 HRGMv2_0223_37_39 52331 54172 + GH13_46
TC HRGMv2_0223_37 HRGMv2_0223_37_40 54298 54933 - 2.A.124.1.4
Gene ID: HRGMv2_0223_37_34
Type: TC
Location: 43184 - 44494 (+)
Gene ID: HRGMv2_0223_37_35
Type: TC
Location: 44542 - 45114 (+)
Gene ID: HRGMv2_0223_37_36
Type: CAZyme
Location: 45338 - 48034 (+)
Gene ID: HRGMv2_0223_37_37
Type: CAZyme
Location: 48169 - 50313 (+)
Gene ID: HRGMv2_0223_37_38
Type: CAZyme
Location: 50415 - 52316 (+)
Gene ID: HRGMv2_0223_37_39
Type: CAZyme
Location: 52331 - 54172 (+)
Gene ID: HRGMv2_0223_37_40
Type: TC
Location: 54298 - 54933 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List