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Cluster: HRGMv2_0223_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0223_44 HRGMv2_0223_44_3 3500 5356 + 3.A.1.106.1
sulfatase HRGMv2_0223_44 HRGMv2_0223_44_4 5379 7370 + S1_27
pfam HRGMv2_0223_44 HRGMv2_0223_44_5 7367 8341 + Lip_A_acyltrans
CAZyme HRGMv2_0223_44 HRGMv2_0223_44_6 8411 9220 + GT11
CAZyme HRGMv2_0223_44 HRGMv2_0223_44_7 9273 10253 + GT2
CAZyme HRGMv2_0223_44 HRGMv2_0223_44_8 10349 11134 - GT2
CAZyme HRGMv2_0223_44 HRGMv2_0223_44_9 11300 12415 + GT4
NULL(UNKNOWN) HRGMv2_0223_44 HRGMv2_0223_44_10 12415 12927 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0223_44 HRGMv2_0223_44_11 12987 14879 - 3.A.3.6.5
Gene ID: HRGMv2_0223_44_3
Type: TC
Location: 3500 - 5356 (+)
Gene ID: HRGMv2_0223_44_4
Type: sulfatase
Location: 5379 - 7370 (+)
Gene ID: HRGMv2_0223_44_5
Type: pfam
Location: 7367 - 8341 (+)
Gene ID: HRGMv2_0223_44_6
Type: CAZyme
Location: 8411 - 9220 (+)
Gene ID: HRGMv2_0223_44_7
Type: CAZyme
Location: 9273 - 10253 (+)
Gene ID: HRGMv2_0223_44_8
Type: CAZyme
Location: 10349 - 11134 (-)
Gene ID: HRGMv2_0223_44_9
Type: CAZyme
Location: 11300 - 12415 (+)
Gene ID: HRGMv2_0223_44_10
Type:
Location: 12415 - 12927 (+)
Gene ID: HRGMv2_0223_44_11
Type: TC
Location: 12987 - 14879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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