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Genome Details

Selected Rep_genome_ID: CGMR098444
Total Genomes Found: 14
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR098444 3,316,778 99.03% 1.45% China Asia CGMR
GCA_021615895.1_ASM2161589v1_genomic 3,035,364 97.67% 1.77% NA Africa H3AfricaPhase1
GCA_021617975.1_ASM2161797v1_genomic 3,134,009 97.48% 1.45% NA Africa H3AfricaPhase1
GCA_021623265.1_ASM2162326v1_genomic 3,409,165 99.03% 1.93% NA Africa H3AfricaPhase1
GCA_021627545.1_ASM2162754v1_genomic 3,521,307 96.34% 1.88% NA Africa H3AfricaPhase1
GCA_021630305.1_ASM2163030v1_genomic 3,326,299 95.67% 3.86% NA Africa H3AfricaPhase1
Rep_2219 3,759,654 99.5169% 1.93237% NA NA WIS
SPMP23_bin.43 3,095,630 95.27% 4.83% Singapore Asia SPMP
SPMP67_bin.103 3,242,742 92.31% 1.61% Singapore Asia SPMP
SPMP81_bin.37 3,229,448 93.63% 4.67% Singapore Asia SPMP
SPMP84_bin.32 2,789,174 93.96% 1.85% Singapore Asia SPMP
SPMP94_bin.133 3,728,507 97.02% 4.5% Singapore Asia SPMP
SPMP99_bin.16 3,556,017 94.69% 2.03% Singapore Asia SPMP
SW067_4 3,276,685 97.58% 1.45% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
CGMR098444_CGC22 CGCFAM_00045 Yes 4 1 alpha-glucan
CGMR098444_CGC42 CGCFAM_00046 Yes 8 1
CGMR098444_CGC46 CGCFAM_00088 Yes 5 2
CGMR098444_CGC17 CGCFAM_00096 Yes 6 3
CGMR098444_CGC52 CGCFAM_00122 Yes 11 4
CGMR098444_CGC33 CGCFAM_00168 Yes 17 7
CGMR098444_CGC24 CGCFAM_00224 Yes 15 5
CGMR098444_CGC5 CGCFAM_00312 Yes 9 2 host glycan
CGMR098444_CGC10 CGCFAM_00338 Yes 3 1
CGMR098444_CGC2 CGCFAM_00391 Yes 3 1
CGMR098444_CGC48 CGCFAM_00636 Yes 13 3
CGMR098444_CGC1 CGCFAM_00704 Yes 26 2
CGMR098444_CGC50 CGCFAM_00801 Yes 6 1
CGMR098444_CGC39 CGCFAM_00850 Yes 6 1
CGMR098444_CGC3 CGCFAM_01016 Yes 13 7
CGMR098444_CGC7 CGCFAM_01023 Yes 7 1
CGMR098444_CGC47 CGCFAM_01573 Yes 9 1
CGMR098444_CGC23 CGCFAM_01599 Yes 8 3
CGMR098444_CGC13 CGCFAM_01676 Yes 7 1
CGMR098444_CGC4 CGCFAM_01690 Yes 9 3
CGMR098444_CGC37 CGCFAM_02008 Yes 5 1
CGMR098444_CGC38 CGCFAM_02008 Yes 3 1
CGMR098444_CGC32 CGCFAM_02095 Yes 7 2
CGMR098444_CGC21 CGCFAM_02129 Yes 8 1
CGMR098444_CGC12 CGCFAM_02490 Yes 6 2
Top CAZyme Families