Cluster: CGMR098444_CGC48
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR098444
- CGC Family ID: CGCFAM_00636
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_14781 | k141_14781_4 | 4279 | 4878 | - | 2.A.115.2.14 |
| TC | k141_14781 | k141_14781_5 | 4946 | 6304 | - | 2.A.45.2.2 |
| CAZyme | k141_14781 | k141_14781_6 | 6591 | 9404 | - | GH3 |
| pfam | k141_14781 | k141_14781_7 | 9539 | 10807 | - | HATPase_c_5 | SPOB_a |
| TF | k141_14781 | k141_14781_8 | 11054 | 11896 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_14781 | k141_14781_9 | 12048 | 13124 | + | GH105 |
| pfam | k141_14781 | k141_14781_10 | 13220 | 13759 | - | tRNA_edit |
| pfam | k141_14781 | k141_14781_11 | 13779 | 14405 | - | LUD_dom |
| CAZyme | k141_14781 | k141_14781_12 | 14842 | 16764 | - | GH127 |
| NULL(UNKNOWN) | k141_14781 | k141_14781_13 | 16787 | 19099 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_14781 | k141_14781_14 | 19103 | 19930 | - | 3.A.1.1.25 |
| TC | k141_14781 | k141_14781_15 | 19933 | 20829 | - | 3.A.1.1.41 |
| TC | k141_14781 | k141_14781_16 | 20914 | 22239 | - | 3.A.1.1.22 |
Gene ID: k141_14781_4
Type: TC
Location: 4279 - 4878 (-)
Type: TC
Location: 4279 - 4878 (-)
Gene ID: k141_14781_5
Type: TC
Location: 4946 - 6304 (-)
Type: TC
Location: 4946 - 6304 (-)
Gene ID: k141_14781_6
Type: CAZyme
Location: 6591 - 9404 (-)
Type: CAZyme
Location: 6591 - 9404 (-)
Gene ID: k141_14781_7
Type: pfam
Location: 9539 - 10807 (-)
Type: pfam
Location: 9539 - 10807 (-)
Gene ID: k141_14781_8
Type: TF
Location: 11054 - 11896 (-)
Type: TF
Location: 11054 - 11896 (-)
Gene ID: k141_14781_9
Type: CAZyme
Location: 12048 - 13124 (+)
Type: CAZyme
Location: 12048 - 13124 (+)
Gene ID: k141_14781_10
Type: pfam
Location: 13220 - 13759 (-)
Type: pfam
Location: 13220 - 13759 (-)
Gene ID: k141_14781_11
Type: pfam
Location: 13779 - 14405 (-)
Type: pfam
Location: 13779 - 14405 (-)
Gene ID: k141_14781_12
Type: CAZyme
Location: 14842 - 16764 (-)
Type: CAZyme
Location: 14842 - 16764 (-)
Gene ID: k141_14781_13
Type:
Location: 16787 - 19099 (-)
Type:
Location: 16787 - 19099 (-)
Gene ID: k141_14781_14
Type: TC
Location: 19103 - 19930 (-)
Type: TC
Location: 19103 - 19930 (-)
Gene ID: k141_14781_15
Type: TC
Location: 19933 - 20829 (-)
Type: TC
Location: 19933 - 20829 (-)
Gene ID: k141_14781_16
Type: TC
Location: 20914 - 22239 (-)
Type: TC
Location: 20914 - 22239 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor acetigignens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_14781_13 | vegetarian > omnivore | 1.11010 | 0.01611 |
| k141_14781_14 | vegetarian > omnivore | 1.44496 | 0.01611 |