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Cluster: CGMR098444_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_40238 k141_40238_42 48554 50713 + GH112
TC k141_40238 k141_40238_43 50784 52139 + 3.A.1.1.4
TC k141_40238 k141_40238_44 52213 53091 + 3.A.1.1.4
TC k141_40238 k141_40238_45 53084 53890 + 3.A.1.1.4
NULL(UNKNOWN) k141_40238 k141_40238_46 53890 54363 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_40238 k141_40238_47 54314 55603 + GH136
TC k141_40238 k141_40238_48 55796 56791 + 3.A.1.11.1
TC k141_40238 k141_40238_49 56766 57644 + 3.A.1.11.1
TC k141_40238 k141_40238_50 57648 58448 + 3.A.1.11.2
Gene ID: k141_40238_42
Type: CAZyme
Location: 48554 - 50713 (+)
Gene ID: k141_40238_43
Type: TC
Location: 50784 - 52139 (+)
Gene ID: k141_40238_44
Type: TC
Location: 52213 - 53091 (+)
Gene ID: k141_40238_45
Type: TC
Location: 53084 - 53890 (+)
Gene ID: k141_40238_46
Type:
Location: 53890 - 54363 (+)
Gene ID: k141_40238_47
Type: CAZyme
Location: 54314 - 55603 (+)
Gene ID: k141_40238_48
Type: TC
Location: 55796 - 56791 (+)
Gene ID: k141_40238_49
Type: TC
Location: 56766 - 57644 (+)
Gene ID: k141_40238_50
Type: TC
Location: 57648 - 58448 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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