Cluster: CGMR098444_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR098444
- CGC Family ID: CGCFAM_01016
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_129597 | k141_129597_16 | 14299 | 15831 | - | GH51_1 |
| CAZyme | k141_129597 | k141_129597_17 | 15896 | 17206 | - | GH28 |
| CAZyme | k141_129597 | k141_129597_18 | 17278 | 19428 | - | GH112 |
| CAZyme | k141_129597 | k141_129597_19 | 19511 | 20923 | - | CE12 |
| CAZyme | k141_129597 | k141_129597_20 | 20924 | 21976 | - | GH105 |
| NULL(UNKNOWN) | k141_129597 | k141_129597_21 | 22186 | 23913 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_129597 | k141_129597_22 | 24057 | 24986 | - | 3.A.1.1.29 |
| TC | k141_129597 | k141_129597_23 | 24999 | 25952 | - | 3.A.1.1.29 |
| TF | k141_129597 | k141_129597_24 | 26393 | 27391 | + | HTH_AraC | HTH_AraC |
| TC | k141_129597 | k141_129597_25 | 27422 | 28756 | - | 2.A.66.1.33 |
| CAZyme | k141_129597 | k141_129597_26 | 28818 | 30848 | - | GH35 |
| pfam | k141_129597 | k141_129597_27 | 30904 | 34233 | - | TPR_6 | TPR_6 | TPR_16 | DUF5107 |
| CAZyme | k141_129597 | k141_129597_28 | 34286 | 37195 | - | GH2 |
Gene ID: k141_129597_16
Type: CAZyme
Location: 14299 - 15831 (-)
Type: CAZyme
Location: 14299 - 15831 (-)
Gene ID: k141_129597_17
Type: CAZyme
Location: 15896 - 17206 (-)
Type: CAZyme
Location: 15896 - 17206 (-)
Gene ID: k141_129597_18
Type: CAZyme
Location: 17278 - 19428 (-)
Type: CAZyme
Location: 17278 - 19428 (-)
Gene ID: k141_129597_19
Type: CAZyme
Location: 19511 - 20923 (-)
Type: CAZyme
Location: 19511 - 20923 (-)
Gene ID: k141_129597_20
Type: CAZyme
Location: 20924 - 21976 (-)
Type: CAZyme
Location: 20924 - 21976 (-)
Gene ID: k141_129597_21
Type:
Location: 22186 - 23913 (-)
Type:
Location: 22186 - 23913 (-)
Gene ID: k141_129597_22
Type: TC
Location: 24057 - 24986 (-)
Type: TC
Location: 24057 - 24986 (-)
Gene ID: k141_129597_23
Type: TC
Location: 24999 - 25952 (-)
Type: TC
Location: 24999 - 25952 (-)
Gene ID: k141_129597_24
Type: TF
Location: 26393 - 27391 (+)
Type: TF
Location: 26393 - 27391 (+)
Gene ID: k141_129597_25
Type: TC
Location: 27422 - 28756 (-)
Type: TC
Location: 27422 - 28756 (-)
Gene ID: k141_129597_26
Type: CAZyme
Location: 28818 - 30848 (-)
Type: CAZyme
Location: 28818 - 30848 (-)
Gene ID: k141_129597_27
Type: pfam
Location: 30904 - 34233 (-)
Type: pfam
Location: 30904 - 34233 (-)
Gene ID: k141_129597_28
Type: CAZyme
Location: 34286 - 37195 (-)
Type: CAZyme
Location: 34286 - 37195 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor acetigignens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.