Cluster: CGMR098444_CGC24
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR098444
- CGC Family ID: CGCFAM_00224
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_15856 | k141_15856_61 | 62929 | 63840 | - | 9.B.70.1.1 |
| TC | k141_15856 | k141_15856_62 | 64067 | 65425 | + | 2.A.38.1.1 |
| TC | k141_15856 | k141_15856_63 | 65446 | 66891 | + | 2.A.38.1.1 |
| CAZyme | k141_15856 | k141_15856_64 | 67264 | 69372 | - | GH3 |
| TF | k141_15856 | k141_15856_65 | 69447 | 70322 | - | HTH_AraC |
| pfam | k141_15856 | k141_15856_66 | 70261 | 70539 | - | Glyco_hydro_3_C |
| CAZyme | k141_15856 | k141_15856_67 | 70687 | 71832 | - | GH8 |
| TC | k141_15856 | k141_15856_68 | 71851 | 72747 | - | 3.A.1.1.29 |
| TC | k141_15856 | k141_15856_69 | 72771 | 73727 | - | 3.A.1.1.29 |
| TC | k141_15856 | k141_15856_70 | 73803 | 75509 | - | 3.A.1.1.29 |
| TF | k141_15856 | k141_15856_71 | 75637 | 77232 | - | HTH_AraC | HTH_AraC |
| TC | k141_15856 | k141_15856_72 | 77207 | 79000 | - | 8.A.59.2.1 |
| CAZyme | k141_15856 | k141_15856_73 | 79096 | 80658 | - | CBM91 | GH43_12 |
| CAZyme | k141_15856 | k141_15856_74 | 80679 | 82415 | - | CE17 |
| CAZyme | k141_15856 | k141_15856_75 | 82508 | 84427 | - | CE1 |
Gene ID: k141_15856_61
Type: TC
Location: 62929 - 63840 (-)
Type: TC
Location: 62929 - 63840 (-)
Gene ID: k141_15856_62
Type: TC
Location: 64067 - 65425 (+)
Type: TC
Location: 64067 - 65425 (+)
Gene ID: k141_15856_63
Type: TC
Location: 65446 - 66891 (+)
Type: TC
Location: 65446 - 66891 (+)
Gene ID: k141_15856_64
Type: CAZyme
Location: 67264 - 69372 (-)
Type: CAZyme
Location: 67264 - 69372 (-)
Gene ID: k141_15856_65
Type: TF
Location: 69447 - 70322 (-)
Type: TF
Location: 69447 - 70322 (-)
Gene ID: k141_15856_66
Type: pfam
Location: 70261 - 70539 (-)
Type: pfam
Location: 70261 - 70539 (-)
Gene ID: k141_15856_67
Type: CAZyme
Location: 70687 - 71832 (-)
Type: CAZyme
Location: 70687 - 71832 (-)
Gene ID: k141_15856_68
Type: TC
Location: 71851 - 72747 (-)
Type: TC
Location: 71851 - 72747 (-)
Gene ID: k141_15856_69
Type: TC
Location: 72771 - 73727 (-)
Type: TC
Location: 72771 - 73727 (-)
Gene ID: k141_15856_70
Type: TC
Location: 73803 - 75509 (-)
Type: TC
Location: 73803 - 75509 (-)
Gene ID: k141_15856_71
Type: TF
Location: 75637 - 77232 (-)
Type: TF
Location: 75637 - 77232 (-)
Gene ID: k141_15856_72
Type: TC
Location: 77207 - 79000 (-)
Type: TC
Location: 77207 - 79000 (-)
Gene ID: k141_15856_73
Type: CAZyme
Location: 79096 - 80658 (-)
Type: CAZyme
Location: 79096 - 80658 (-)
Gene ID: k141_15856_74
Type: CAZyme
Location: 80679 - 82415 (-)
Type: CAZyme
Location: 80679 - 82415 (-)
Gene ID: k141_15856_75
Type: CAZyme
Location: 82508 - 84427 (-)
Type: CAZyme
Location: 82508 - 84427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor acetigignens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.