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Cluster: CGMR098444_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_3526 k141_3526_15 15579 23777 - GH43_24 | GH59
CAZyme k141_3526 k141_3526_16 24051 25790 - GH154
CAZyme k141_3526 k141_3526_17 26110 27324 - GH88
TC k141_3526 k141_3526_18 27449 28288 - 3.A.1.1.11
pfam k141_3526 k141_3526_19 28303 29094 - DUF7402
TC k141_3526 k141_3526_20 29094 29993 - 3.A.1.1.20
STP k141_3526 k141_3526_21 30129 31493 - SBP_bac_1
TC k141_3526 k141_3526_22 31833 33608 + 8.A.59.2.1
TF k141_3526 k141_3526_23 33642 35240 + HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_3526 k141_3526_24 35267 35389 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_3526 k141_3526_25 35370 37322 + PL33_1
Gene ID: k141_3526_15
Type: CAZyme
Location: 15579 - 23777 (-)
Gene ID: k141_3526_16
Type: CAZyme
Location: 24051 - 25790 (-)
Gene ID: k141_3526_17
Type: CAZyme
Location: 26110 - 27324 (-)
Gene ID: k141_3526_18
Type: TC
Location: 27449 - 28288 (-)
Gene ID: k141_3526_19
Type: pfam
Location: 28303 - 29094 (-)
Gene ID: k141_3526_20
Type: TC
Location: 29094 - 29993 (-)
Gene ID: k141_3526_21
Type: STP
Location: 30129 - 31493 (-)
Gene ID: k141_3526_22
Type: TC
Location: 31833 - 33608 (+)
Gene ID: k141_3526_23
Type: TF
Location: 33642 - 35240 (+)
Gene ID: k141_3526_24
Type:
Location: 35267 - 35389 (+)
Gene ID: k141_3526_25
Type: CAZyme
Location: 35370 - 37322 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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