Cluster: CGMR098444_CGC33
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR098444
- CGC Family ID: CGCFAM_00168
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_101173 | k141_101173_16 | 21044 | 21982 | - | GT2 |
| pfam | k141_101173 | k141_101173_17 | 22161 | 23372 | - | LytR_cpsA_psr |
| TC | k141_101173 | k141_101173_18 | 23390 | 24796 | - | 9.B.18.1.1 |
| CAZyme | k141_101173 | k141_101173_19 | 24898 | 25914 | - | GT2 |
| CAZyme | k141_101173 | k141_101173_20 | 25911 | 27335 | - | GT2 |
| pfam | k141_101173 | k141_101173_21 | 27485 | 29206 | - | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | k141_101173 | k141_101173_22 | 29304 | 31370 | - | GT2 |
| CAZyme | k141_101173 | k141_101173_23 | 31422 | 33455 | - | GT2 |
| pfam | k141_101173 | k141_101173_24 | 33469 | 35541 | - | CMAS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 |
| TC | k141_101173 | k141_101173_25 | 35545 | 36885 | - | 3.A.1.103.6 |
| NULL(UNKNOWN) | k141_101173 | k141_101173_26 | 36891 | 38417 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_101173 | k141_101173_27 | 38570 | 39562 | - | 3.A.1.104.1 |
| pfam | k141_101173 | k141_101173_28 | 39549 | 40121 | - | dTDP_sugar_isom |
| CAZyme | k141_101173 | k141_101173_29 | 40153 | 41445 | - | GH25 |
| pfam | k141_101173 | k141_101173_30 | 41435 | 42304 | - | NTP_transferase | NTP_transf_3 |
| pfam | k141_101173 | k141_101173_31 | 42402 | 43565 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| CAZyme | k141_101173 | k141_101173_32 | 43796 | 44947 | - | GH25 |
Gene ID: k141_101173_16
Type: CAZyme
Location: 21044 - 21982 (-)
Type: CAZyme
Location: 21044 - 21982 (-)
Gene ID: k141_101173_17
Type: pfam
Location: 22161 - 23372 (-)
Type: pfam
Location: 22161 - 23372 (-)
Gene ID: k141_101173_18
Type: TC
Location: 23390 - 24796 (-)
Type: TC
Location: 23390 - 24796 (-)
Gene ID: k141_101173_19
Type: CAZyme
Location: 24898 - 25914 (-)
Type: CAZyme
Location: 24898 - 25914 (-)
Gene ID: k141_101173_20
Type: CAZyme
Location: 25911 - 27335 (-)
Type: CAZyme
Location: 25911 - 27335 (-)
Gene ID: k141_101173_21
Type: pfam
Location: 27485 - 29206 (-)
Type: pfam
Location: 27485 - 29206 (-)
Gene ID: k141_101173_22
Type: CAZyme
Location: 29304 - 31370 (-)
Type: CAZyme
Location: 29304 - 31370 (-)
Gene ID: k141_101173_23
Type: CAZyme
Location: 31422 - 33455 (-)
Type: CAZyme
Location: 31422 - 33455 (-)
Gene ID: k141_101173_24
Type: pfam
Location: 33469 - 35541 (-)
Type: pfam
Location: 33469 - 35541 (-)
Gene ID: k141_101173_25
Type: TC
Location: 35545 - 36885 (-)
Type: TC
Location: 35545 - 36885 (-)
Gene ID: k141_101173_26
Type:
Location: 36891 - 38417 (-)
Type:
Location: 36891 - 38417 (-)
Gene ID: k141_101173_27
Type: TC
Location: 38570 - 39562 (-)
Type: TC
Location: 38570 - 39562 (-)
Gene ID: k141_101173_28
Type: pfam
Location: 39549 - 40121 (-)
Type: pfam
Location: 39549 - 40121 (-)
Gene ID: k141_101173_29
Type: CAZyme
Location: 40153 - 41445 (-)
Type: CAZyme
Location: 40153 - 41445 (-)
Gene ID: k141_101173_30
Type: pfam
Location: 41435 - 42304 (-)
Type: pfam
Location: 41435 - 42304 (-)
Gene ID: k141_101173_31
Type: pfam
Location: 42402 - 43565 (-)
Type: pfam
Location: 42402 - 43565 (-)
Gene ID: k141_101173_32
Type: CAZyme
Location: 43796 - 44947 (-)
Type: CAZyme
Location: 43796 - 44947 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor acetigignens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.