Cluster: CGMR098444_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR098444
- CGC Family ID: CGCFAM_01676
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_40604 | k141_40604_2 | 638 | 2194 | + | GH28 |
| pfam | k141_40604 | k141_40604_3 | 2453 | 3289 | + | AP_endonuc_2 |
| pfam | k141_40604 | k141_40604_4 | 3344 | 4105 | + | ThiF |
| TC | k141_40604 | k141_40604_5 | 4179 | 5942 | + | 1.B.52.2.1 |
| STP | k141_40604 | k141_40604_6 | 6029 | 6589 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | k141_40604 | k141_40604_7 | 6614 | 7273 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_40604 | k141_40604_8 | 7278 | 8627 | + | 2.A.66.1.33 |
Gene ID: k141_40604_2
Type: CAZyme
Location: 638 - 2194 (+)
Type: CAZyme
Location: 638 - 2194 (+)
Gene ID: k141_40604_3
Type: pfam
Location: 2453 - 3289 (+)
Type: pfam
Location: 2453 - 3289 (+)
Gene ID: k141_40604_4
Type: pfam
Location: 3344 - 4105 (+)
Type: pfam
Location: 3344 - 4105 (+)
Gene ID: k141_40604_5
Type: TC
Location: 4179 - 5942 (+)
Type: TC
Location: 4179 - 5942 (+)
Gene ID: k141_40604_6
Type: STP
Location: 6029 - 6589 (+)
Type: STP
Location: 6029 - 6589 (+)
Gene ID: k141_40604_7
Type:
Location: 6614 - 7273 (+)
Type:
Location: 6614 - 7273 (+)
Gene ID: k141_40604_8
Type: TC
Location: 7278 - 8627 (+)
Type: TC
Location: 7278 - 8627 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor acetigignens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.