Cluster: CGMR098444_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: CGMR098444
- CGC Family ID: CGCFAM_00045
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_98230 | k141_98230_4 | 2096 | 2806 | + | 3.A.1.1.2 |
| TC | k141_98230 | k141_98230_5 | 2844 | 3734 | + | 3.A.1.1.2 |
| TC | k141_98230 | k141_98230_6 | 3742 | 4587 | + | 3.A.1.1.27 |
| CAZyme | k141_98230 | k141_98230_7 | 4603 | 6330 | + | CBM34 | GH13_20 |
Gene ID: k141_98230_4
Type: TC
Location: 2096 - 2806 (+)
Type: TC
Location: 2096 - 2806 (+)
Gene ID: k141_98230_5
Type: TC
Location: 2844 - 3734 (+)
Type: TC
Location: 2844 - 3734 (+)
Gene ID: k141_98230_6
Type: TC
Location: 3742 - 4587 (+)
Type: TC
Location: 3742 - 4587 (+)
Gene ID: k141_98230_7
Type: CAZyme
Location: 4603 - 6330 (+)
Type: CAZyme
Location: 4603 - 6330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Species
Acetatifactor acetigignens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_98230_4 | vegan > omnivore | 1.17022 | 0.03593 |
| k141_98230_4 | vegetarian > omnivore | 1.08690 | 0.01611 |
| k141_98230_5 | vegan > omnivore | 1.12182 | 0.03533 |
| k141_98230_5 | vegetarian > omnivore | 1.05546 | 0.01291 |