Genome Details
Selected Rep_genome_ID: CGMR030438
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR030438 | 4,073,720 | 99.23% | 0% | China | Asia | CGMR |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR030438_CGC42 | CGCFAM_00001 | Yes | 6 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| CGMR030438_CGC54 | CGCFAM_00003 | Yes | 11 | 5 | |
| CGMR030438_CGC41 | CGCFAM_00023 | Yes | 6 | 3 | |
| CGMR030438_CGC59 | CGCFAM_00721 | Yes | 3 | 1 | |
| CGMR030438_CGC64 | CGCFAM_00829 | Yes | 10 | 5 | |
| CGMR030438_CGC8 | CGCFAM_01404 | Yes | 13 | 4 | |
| CGMR030438_CGC38 | CGCFAM_02082 | Yes | 10 | 6 | |
| CGMR030438_CGC16 | CGCFAM_02567 | Yes | 5 | 2 | |
| CGMR030438_CGC10 | CGCFAM_02612 | Yes | 6 | 1 | |
| CGMR030438_CGC28 | CGCFAM_02613 | Yes | 10 | 2 | |
| CGMR030438_CGC57 | CGCFAM_03441 | Yes | 13 | 3 | |
| CGMR030438_CGC30 | CGCFAM_04942 | Yes | 6 | 2 | |
| CGMR030438_CGC43 | CGCFAM_05461 | Yes | 3 | 1 | |
| CGMR030438_CGC45 | CGCFAM_07490 | Yes | 15 | 4 | |
| CGMR030438_CGC62 | CGCFAM_07495 | Yes | 6 | 1 |
Top CAZyme Families