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Cluster: CGMR030438_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_88057 k141_88057_16 19831 21093 + GT4
NULL(UNKNOWN) k141_88057 k141_88057_17 21100 22356 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_88057 k141_88057_18 22353 23549 + GT4
CAZyme k141_88057 k141_88057_19 23554 24690 + GT4
CAZyme k141_88057 k141_88057_20 24746 25888 + GT4
pfam k141_88057 k141_88057_21 26049 26939 + Acyl_transf_3
NULL(UNKNOWN) k141_88057 k141_88057_22 27026 27121 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_88057 k141_88057_23 27400 28629 + GT4
pfam k141_88057 k141_88057_24 28626 29552 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
pfam k141_88057 k141_88057_25 29556 30524 + Glycos_transf_4
TC k141_88057 k141_88057_26 30538 31611 + 9.B.18.2.1
Gene ID: k141_88057_16
Type: CAZyme
Location: 19831 - 21093 (+)
Gene ID: k141_88057_17
Type:
Location: 21100 - 22356 (+)
Gene ID: k141_88057_18
Type: CAZyme
Location: 22353 - 23549 (+)
Gene ID: k141_88057_19
Type: CAZyme
Location: 23554 - 24690 (+)
Gene ID: k141_88057_20
Type: CAZyme
Location: 24746 - 25888 (+)
Gene ID: k141_88057_21
Type: pfam
Location: 26049 - 26939 (+)
Gene ID: k141_88057_22
Type:
Location: 27026 - 27121 (+)
Gene ID: k141_88057_23
Type: CAZyme
Location: 27400 - 28629 (+)
Gene ID: k141_88057_24
Type: pfam
Location: 28626 - 29552 (+)
Gene ID: k141_88057_25
Type: pfam
Location: 29556 - 30524 (+)
Gene ID: k141_88057_26
Type: TC
Location: 30538 - 31611 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_88057_24 vegetarian > vegan 1.24455 0.00455
k141_88057_25 vegetarian > omnivore 1.51187 0.00085
k141_88057_25 vegetarian > vegan 1.60622 0.00455

🧭 Explore Read Mapping of CGC

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