Cluster: CGMR030438_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR030438
- CGC Family ID: CGCFAM_00023
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_49261 | k141_49261_7 | 6532 | 7320 | - | GH16_3 |
| CAZyme | k141_49261 | k141_49261_8 | 7430 | 10090 | - | GH2 |
| NULL(UNKNOWN) | k141_49261 | k141_49261_9 | 10153 | 10263 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_49261 | k141_49261_10 | 10419 | 12470 | - | GH20 |
| TC | k141_49261 | k141_49261_11 | 12608 | 14158 | - | 8.A.46.1.3 |
| TC | k141_49261 | k141_49261_12 | 14172 | 17462 | - | 1.B.14.6.1 |
Gene ID: k141_49261_7
Type: CAZyme
Location: 6532 - 7320 (-)
Type: CAZyme
Location: 6532 - 7320 (-)
Gene ID: k141_49261_8
Type: CAZyme
Location: 7430 - 10090 (-)
Type: CAZyme
Location: 7430 - 10090 (-)
Gene ID: k141_49261_9
Type:
Location: 10153 - 10263 (+)
Type:
Location: 10153 - 10263 (+)
Gene ID: k141_49261_10
Type: CAZyme
Location: 10419 - 12470 (-)
Type: CAZyme
Location: 10419 - 12470 (-)
Gene ID: k141_49261_11
Type: TC
Location: 12608 - 14158 (-)
Type: TC
Location: 12608 - 14158 (-)
Gene ID: k141_49261_12
Type: TC
Location: 14172 - 17462 (-)
Type: TC
Location: 14172 - 17462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.