Cluster: CGMR030438_CGC62
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030438
- CGC Family ID: CGCFAM_07495
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_141951 | k141_141951_1 | 148 | 726 | + | 8.A.46.1.6 |
| NULL(UNKNOWN) | k141_141951 | k141_141951_2 | 720 | 2477 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_141951 | k141_141951_3 | 2487 | 3605 | + | GH105 |
| STP | k141_141951 | k141_141951_4 | 3705 | 4937 | + | EPSP_synthase |
| NULL(UNKNOWN) | k141_141951 | k141_141951_5 | 5007 | 5429 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_141951 | k141_141951_6 | 5563 | 6366 | + | 3.A.1.15.6 |
Gene ID: k141_141951_1
Type: TC
Location: 148 - 726 (+)
Type: TC
Location: 148 - 726 (+)
Gene ID: k141_141951_2
Type:
Location: 720 - 2477 (+)
Type:
Location: 720 - 2477 (+)
Gene ID: k141_141951_3
Type: CAZyme
Location: 2487 - 3605 (+)
Type: CAZyme
Location: 2487 - 3605 (+)
Gene ID: k141_141951_4
Type: STP
Location: 3705 - 4937 (+)
Type: STP
Location: 3705 - 4937 (+)
Gene ID: k141_141951_5
Type:
Location: 5007 - 5429 (+)
Type:
Location: 5007 - 5429 (+)
Gene ID: k141_141951_6
Type: TC
Location: 5563 - 6366 (+)
Type: TC
Location: 5563 - 6366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_141951_3 | vegan > omnivore | 1.15081 | 0.03430 |
| k141_141951_3 | vegetarian > omnivore | 1.11657 | 0.00085 |