Cluster: CGMR030438_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR030438
- CGC Family ID: CGCFAM_02612
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2142 | k141_2142_1 | 281 | 2503 | - | GH92 |
| TC | k141_2142 | k141_2142_2 | 2600 | 3475 | - | 2.A.64.1.3 |
| pfam | k141_2142 | k141_2142_3 | 3479 | 3673 | - | TatA_B_E |
| pfam | k141_2142 | k141_2142_4 | 3815 | 4696 | + | Acyl_transf_1 |
| TC | k141_2142 | k141_2142_5 | 4773 | 6692 | - | 8.A.46.2.2 |
| TC | k141_2142 | k141_2142_6 | 6739 | 9912 | - | 1.B.14.6.13 |
Gene ID: k141_2142_1
Type: CAZyme
Location: 281 - 2503 (-)
Type: CAZyme
Location: 281 - 2503 (-)
Gene ID: k141_2142_2
Type: TC
Location: 2600 - 3475 (-)
Type: TC
Location: 2600 - 3475 (-)
Gene ID: k141_2142_3
Type: pfam
Location: 3479 - 3673 (-)
Type: pfam
Location: 3479 - 3673 (-)
Gene ID: k141_2142_4
Type: pfam
Location: 3815 - 4696 (+)
Type: pfam
Location: 3815 - 4696 (+)
Gene ID: k141_2142_5
Type: TC
Location: 4773 - 6692 (-)
Type: TC
Location: 4773 - 6692 (-)
Gene ID: k141_2142_6
Type: TC
Location: 6739 - 9912 (-)
Type: TC
Location: 6739 - 9912 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides merdae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.