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Cluster: CGMR030438_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18018 k141_18018_8 10693 11862 + 1.A.23.4.5
TC k141_18018 k141_18018_9 12102 13367 + 1.A.23.4.5
NULL(UNKNOWN) k141_18018 k141_18018_10 13446 15722 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_18018 k141_18018_11 15741 17999 + GH89
CAZyme k141_18018 k141_18018_12 18020 20836 + CBM51
pfam k141_18018 k141_18018_13 20850 23534 + GH123_N
pfam k141_18018 k141_18018_14 24676 26112 + Aldedh
TC k141_18018 k141_18018_15 26212 26700 - 3.D.1.5.1
TC k141_18018 k141_18018_16 26713 28503 - 3.D.1.5.1
TC k141_18018 k141_18018_17 28537 30330 - 3.D.1.5.1
Gene ID: k141_18018_8
Type: TC
Location: 10693 - 11862 (+)
Gene ID: k141_18018_9
Type: TC
Location: 12102 - 13367 (+)
Gene ID: k141_18018_10
Type:
Location: 13446 - 15722 (+)
Gene ID: k141_18018_11
Type: CAZyme
Location: 15741 - 17999 (+)
Gene ID: k141_18018_12
Type: CAZyme
Location: 18020 - 20836 (+)
Gene ID: k141_18018_13
Type: pfam
Location: 20850 - 23534 (+)
Gene ID: k141_18018_14
Type: pfam
Location: 24676 - 26112 (+)
Gene ID: k141_18018_15
Type: TC
Location: 26212 - 26700 (-)
Gene ID: k141_18018_16
Type: TC
Location: 26713 - 28503 (-)
Gene ID: k141_18018_17
Type: TC
Location: 28537 - 30330 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_18018_12 vegetarian > omnivore 1.28834 0.00085
k141_18018_13 vegetarian > omnivore 1.18598 0.00085

🧭 Explore Read Mapping of CGC

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