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Genome Details

Selected Rep_genome_ID: C55.bin_4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Streptococcaceae
→
Genus
Streptococcus
→
Species
Streptococcus caecimuris
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
C55.bin_4 2,031,146 99.18% 0% China(Inner Mongolia) Asia IMGG
CGMR013656 1,720,036 91.53% 0.08% China Asia CGMR
CGMR050539 1,878,138 96.81% 0.52% China Asia CGMR
CGMR095244 1,865,642 95.43% 0.76% China Asia CGMR
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
C55.bin_4_CGC2 CGCFAM_00003 Yes 16 7
C55.bin_4_CGC3 CGCFAM_00004 Yes 5 2 alpha-glucan
C55.bin_4_CGC29 CGCFAM_00010 Yes 9 3 alpha-glucan
C55.bin_4_CGC10 CGCFAM_00057 Yes 4 1
C55.bin_4_CGC17 CGCFAM_00067 Yes 5 2 galactan
C55.bin_4_CGC4 CGCFAM_00097 Yes 4 1
C55.bin_4_CGC25 CGCFAM_00102 Yes 7 2
C55.bin_4_CGC22 CGCFAM_00235 Yes 3 1
C55.bin_4_CGC14 CGCFAM_00311 Yes 14 4 host glycan
C55.bin_4_CGC26 CGCFAM_00530 Yes 8 2
C55.bin_4_CGC1 CGCFAM_00638 Yes 4 1
C55.bin_4_CGC9 CGCFAM_01048 Yes 5 1
C55.bin_4_CGC19 CGCFAM_02168 Yes 6 2
C55.bin_4_CGC30 CGCFAM_02715 Yes 5 1
C55.bin_4_CGC8 CGCFAM_02737 Yes 11 1
C55.bin_4_CGC12 CGCFAM_03664 Yes 11 1
C55.bin_4_CGC13 CGCFAM_03665 Yes 6 2
C55.bin_4_CGC27 CGCFAM_04780 Yes 4 2
C55.bin_4_CGC20 CGCFAM_04974 Yes 6 3
C55.bin_4_CGC16 CGCFAM_05162 Yes 7 1
C55.bin_4_CGC24 CGCFAM_05260 Yes 4 1
C55.bin_4_CGC28 CGCFAM_05261 Yes 14 4
C55.bin_4_CGC6 CGCFAM_07840 Yes 4 1
C55.bin_4_CGC23 CGCFAM_08007 Yes 5 2
Top CAZyme Families