Cluster: C55.bin_4_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.bin_4
- CGC Family ID: CGCFAM_05162
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C55_contig_756 | C55_contig_756_140 | 134907 | 136553 | - | 3.A.1.147.8 |
| TC | C55_contig_756 | C55_contig_756_141 | 136543 | 137286 | - | 3.A.1.147.8 |
| peptidase | C55_contig_756 | C55_contig_756_142 | 137326 | 138963 | - | M20.UPW |
| CAZyme | C55_contig_756 | C55_contig_756_143 | 139166 | 140647 | + | GH13_5 |
| pfam | C55_contig_756 | C55_contig_756_144 | 140837 | 141151 | - | Thioredoxin | AhpC-TSA | TraF |
| peptidase | C55_contig_756 | C55_contig_756_145 | 141249 | 144278 | - | S15.UPW |
| TC | C55_contig_756 | C55_contig_756_146 | 144398 | 146383 | - | 3.A.1.5.19 |
Gene ID: C55_contig_756_140
Type: TC
Location: 134907 - 136553 (-)
Type: TC
Location: 134907 - 136553 (-)
Gene ID: C55_contig_756_141
Type: TC
Location: 136543 - 137286 (-)
Type: TC
Location: 136543 - 137286 (-)
Gene ID: C55_contig_756_142
Type: peptidase
Location: 137326 - 138963 (-)
Type: peptidase
Location: 137326 - 138963 (-)
Gene ID: C55_contig_756_143
Type: CAZyme
Location: 139166 - 140647 (+)
Type: CAZyme
Location: 139166 - 140647 (+)
Gene ID: C55_contig_756_144
Type: pfam
Location: 140837 - 141151 (-)
Type: pfam
Location: 140837 - 141151 (-)
Gene ID: C55_contig_756_145
Type: peptidase
Location: 141249 - 144278 (-)
Type: peptidase
Location: 141249 - 144278 (-)
Gene ID: C55_contig_756_146
Type: TC
Location: 144398 - 146383 (-)
Type: TC
Location: 144398 - 146383 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.