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Cluster: C55.bin_4_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C55_contig_756 C55_contig_756_802 900927 903185 - GT35
CAZyme C55_contig_756 C55_contig_756_803 903229 904758 - GH77
TC C55_contig_756 C55_contig_756_804 905207 906463 + 3.A.1.1.26
TC C55_contig_756 C55_contig_756_805 906591 907886 + 3.A.1.1.26
TC C55_contig_756 C55_contig_756_806 907888 908730 + 3.A.1.1.26
NULL(UNKNOWN) C55_contig_756 C55_contig_756_807 908874 909686 + NULL(UNKNOWN)
[View Structural Homologs]
TF C55_contig_756 C55_contig_756_808 909698 910681 + LacI
CAZyme C55_contig_756 C55_contig_756_809 910690 912765 + GH13_14
TC C55_contig_756 C55_contig_756_810 912795 913736 - 2.A.115.1.1
Gene ID: C55_contig_756_802
Type: CAZyme
Location: 900927 - 903185 (-)
Gene ID: C55_contig_756_803
Type: CAZyme
Location: 903229 - 904758 (-)
Gene ID: C55_contig_756_804
Type: TC
Location: 905207 - 906463 (+)
Gene ID: C55_contig_756_805
Type: TC
Location: 906591 - 907886 (+)
Gene ID: C55_contig_756_806
Type: TC
Location: 907888 - 908730 (+)
Gene ID: C55_contig_756_807
Type:
Location: 908874 - 909686 (+)
Gene ID: C55_contig_756_808
Type: TF
Location: 909698 - 910681 (+)
Gene ID: C55_contig_756_809
Type: CAZyme
Location: 910690 - 912765 (+)
Gene ID: C55_contig_756_810
Type: TC
Location: 912795 - 913736 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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