dbCAN Logo

Cluster: C55.bin_4_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme C55_contig_756 C55_contig_756_688 750039 750821 - CE1
pfam C55_contig_756 C55_contig_756_689 750892 752553 - Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP
NULL(UNKNOWN) C55_contig_756 C55_contig_756_690 752757 753299 - NULL(UNKNOWN)
[View Structural Homologs]
TC C55_contig_756 C55_contig_756_691 754077 754841 - 3.A.1.34.1
TC C55_contig_756 C55_contig_756_692 754838 755704 - 3.A.1.34.1
pfam C55_contig_756 C55_contig_756_693 755867 756415 - Gram_pos_anchor
pfam C55_contig_756 C55_contig_756_694 756412 758361 - GbpC
CAZyme C55_contig_756 C55_contig_756_695 758974 762861 + GH66
Gene ID: C55_contig_756_688
Type: CAZyme
Location: 750039 - 750821 (-)
Gene ID: C55_contig_756_689
Type: pfam
Location: 750892 - 752553 (-)
Gene ID: C55_contig_756_690
Type:
Location: 752757 - 753299 (-)
Gene ID: C55_contig_756_691
Type: TC
Location: 754077 - 754841 (-)
Gene ID: C55_contig_756_692
Type: TC
Location: 754838 - 755704 (-)
Gene ID: C55_contig_756_693
Type: pfam
Location: 755867 - 756415 (-)
Gene ID: C55_contig_756_694
Type: pfam
Location: 756412 - 758361 (-)
Gene ID: C55_contig_756_695
Type: CAZyme
Location: 758974 - 762861 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List