Cluster: C55.bin_4_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: C55.bin_4
- CGC Family ID: CGCFAM_00057
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C55_contig_1410 | C55_contig_1410_135 | 144082 | 147609 | - | GH20 | GH20 |
| pfam | C55_contig_1410 | C55_contig_1410_136 | 147771 | 148904 | - | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| peptidase | C55_contig_1410 | C55_contig_1410_137 | 149121 | 149753 | - | C56.UNW |
| TC | C55_contig_1410 | C55_contig_1410_138 | 149940 | 151763 | - | 1.A.33.1.4 |
Gene ID: C55_contig_1410_135
Type: CAZyme
Location: 144082 - 147609 (-)
Type: CAZyme
Location: 144082 - 147609 (-)
Gene ID: C55_contig_1410_136
Type: pfam
Location: 147771 - 148904 (-)
Type: pfam
Location: 147771 - 148904 (-)
Gene ID: C55_contig_1410_137
Type: peptidase
Location: 149121 - 149753 (-)
Type: peptidase
Location: 149121 - 149753 (-)
Gene ID: C55_contig_1410_138
Type: TC
Location: 149940 - 151763 (-)
Type: TC
Location: 149940 - 151763 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C55_contig_1410_136 | vegetarian > omnivore | 1.18955 | 0.00341 |