Genome Details
Selected Rep_genome_ID: C151.CMAG_2
Total Genomes Found: 6
Total Genomes Found: 6
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C151.CMAG_2 | 3,088,073 | 97.99% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR049281 | 2,366,681 | 95.3% | 0% | China | Asia | CGMR |
| HRGMv2_2697 | 3,100,145 | 97.98% | 0% | NA | NA | HRGM |
| KY138_48_sub | 2,450,007 | 98.66% | 0% | NA | Africa | H3AfricaPhase2 |
| MGYG000001021 | 2,360,136 | 97.32% | 0% | Sweden | Europe | UHGG |
| Rep_3342 | 3,024,004 | 91.5898% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| C151.CMAG_2_CGC12 | CGCFAM_00162 | Yes | 5 | 1 | |
| C151.CMAG_2_CGC3 | CGCFAM_00231 | Yes | 5 | 1 | |
| C151.CMAG_2_CGC35 | CGCFAM_00317 | Yes | 10 | 2 | |
| C151.CMAG_2_CGC20 | CGCFAM_00766 | Yes | 4 | 1 | |
| C151.CMAG_2_CGC31 | CGCFAM_01574 | Yes | 6 | 1 | |
| C151.CMAG_2_CGC36 | CGCFAM_03009 | Yes | 13 | 3 | |
| C151.CMAG_2_CGC15 | CGCFAM_03130 | Yes | 7 | 4 | |
| C151.CMAG_2_CGC29 | CGCFAM_03639 | Yes | 3 | 1 | |
| C151.CMAG_2_CGC16 | CGCFAM_04264 | Yes | 11 | 3 | |
| C151.CMAG_2_CGC22 | CGCFAM_04445 | Yes | 11 | 1 | |
| C151.CMAG_2_CGC18 | CGCFAM_06783 | Yes | 11 | 3 | |
| C151.CMAG_2_CGC5 | CGCFAM_06784 | Yes | 7 | 1 | |
| C151.CMAG_2_CGC37 | CGCFAM_07934 | Yes | 9 | 4 |
Top CAZyme Families