Cluster: C151.CMAG_2_CGC16
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_04264
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C151_contig_644 | C151_contig_644_1436 | 1506404 | 1507774 | + | GH1 |
| TC | C151_contig_644 | C151_contig_644_1437 | 1507841 | 1509196 | - | 2.A.22.5.3 |
| STP | C151_contig_644 | C151_contig_644_1438 | 1509454 | 1510299 | + | NUDIX |
| pfam | C151_contig_644 | C151_contig_644_1439 | 1510296 | 1511693 | + | MatE | MatE | MurJ |
| TC | C151_contig_644 | C151_contig_644_1440 | 1511751 | 1513538 | - | 3.A.1.120.6 |
| pfam | C151_contig_644 | C151_contig_644_1441 | 1513815 | 1515185 | + | MatE | MatE | MurJ |
| TF | C151_contig_644 | C151_contig_644_1442 | 1515232 | 1516647 | - | GntR |
| CAZyme | C151_contig_644 | C151_contig_644_1443 | 1516613 | 1519714 | - | GH59 |
| pfam | C151_contig_644 | C151_contig_644_1444 | 1519692 | 1520435 | - | Methyltransf_4 | Methyltransf_31 |
| pfam | C151_contig_644 | C151_contig_644_1445 | 1520708 | 1521187 | - | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | C151_contig_644 | C151_contig_644_1446 | 1521200 | 1522996 | - | GH5_1 |
Gene ID: C151_contig_644_1436
Type: CAZyme
Location: 1506404 - 1507774 (+)
Type: CAZyme
Location: 1506404 - 1507774 (+)
Gene ID: C151_contig_644_1437
Type: TC
Location: 1507841 - 1509196 (-)
Type: TC
Location: 1507841 - 1509196 (-)
Gene ID: C151_contig_644_1438
Type: STP
Location: 1509454 - 1510299 (+)
Type: STP
Location: 1509454 - 1510299 (+)
Gene ID: C151_contig_644_1439
Type: pfam
Location: 1510296 - 1511693 (+)
Type: pfam
Location: 1510296 - 1511693 (+)
Gene ID: C151_contig_644_1440
Type: TC
Location: 1511751 - 1513538 (-)
Type: TC
Location: 1511751 - 1513538 (-)
Gene ID: C151_contig_644_1441
Type: pfam
Location: 1513815 - 1515185 (+)
Type: pfam
Location: 1513815 - 1515185 (+)
Gene ID: C151_contig_644_1442
Type: TF
Location: 1515232 - 1516647 (-)
Type: TF
Location: 1515232 - 1516647 (-)
Gene ID: C151_contig_644_1443
Type: CAZyme
Location: 1516613 - 1519714 (-)
Type: CAZyme
Location: 1516613 - 1519714 (-)
Gene ID: C151_contig_644_1444
Type: pfam
Location: 1519692 - 1520435 (-)
Type: pfam
Location: 1519692 - 1520435 (-)
Gene ID: C151_contig_644_1445
Type: pfam
Location: 1520708 - 1521187 (-)
Type: pfam
Location: 1520708 - 1521187 (-)
Gene ID: C151_contig_644_1446
Type: CAZyme
Location: 1521200 - 1522996 (-)
Type: CAZyme
Location: 1521200 - 1522996 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_1436 | vegan > omnivore | 1.00474 | 0.00168 |
| C151_contig_644_1437 | vegan > omnivore | 1.94186 | 0.00168 |
| C151_contig_644_1445 | vegan > omnivore | 1.59274 | 0.00168 |
| C151_contig_644_1445 | vegetarian > omnivore | 1.97324 | 0.00397 |