Cluster: C151.CMAG_2_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_00162
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_641 | 714533 | 716323 | + | 3.A.1.21.1 |
| TC | C151_contig_644 | C151_contig_644_642 | 716320 | 718050 | + | 3.A.1.21.1 |
| TF | C151_contig_644 | C151_contig_644_643 | 718541 | 719389 | + | HTH_AraC |
| TC | C151_contig_644 | C151_contig_644_644 | 719570 | 720904 | + | 2.A.2.3.3 |
| CAZyme | C151_contig_644 | C151_contig_644_645 | 720897 | 722543 | + | CBM91 | GH43_11 |
Gene ID: C151_contig_644_641
Type: TC
Location: 714533 - 716323 (+)
Type: TC
Location: 714533 - 716323 (+)
Gene ID: C151_contig_644_642
Type: TC
Location: 716320 - 718050 (+)
Type: TC
Location: 716320 - 718050 (+)
Gene ID: C151_contig_644_643
Type: TF
Location: 718541 - 719389 (+)
Type: TF
Location: 718541 - 719389 (+)
Gene ID: C151_contig_644_644
Type: TC
Location: 719570 - 720904 (+)
Type: TC
Location: 719570 - 720904 (+)
Gene ID: C151_contig_644_645
Type: CAZyme
Location: 720897 - 722543 (+)
Type: CAZyme
Location: 720897 - 722543 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_644 | vegan > omnivore | 1.28451 | 0.00168 |
| C151_contig_644_644 | vegetarian > omnivore | 1.58933 | 0.00397 |
| C151_contig_644_645 | vegetarian > omnivore | 1.11008 | 0.00397 |