Cluster: C151.CMAG_2_CGC35
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_00317
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_2370 | 2597563 | 2598267 | - | 9.B.100.1.1 |
| NULL(UNKNOWN) | C151_contig_644 | C151_contig_644_2371 | 2598602 | 2599036 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | C151_contig_644 | C151_contig_644_2372 | 2599058 | 2600002 | - | 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | C151_contig_644 | C151_contig_644_2373 | 2599999 | 2601150 | - | GT4 |
| CAZyme | C151_contig_644 | C151_contig_644_2374 | 2601143 | 2602294 | - | GT4 |
| pfam | C151_contig_644 | C151_contig_644_2375 | 2602388 | 2603422 | - | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| pfam | C151_contig_644 | C151_contig_644_2376 | 2603470 | 2604546 | - | NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix |
| TC | C151_contig_644 | C151_contig_644_2377 | 2604543 | 2606141 | - | 9.B.18.1.3 |
| peptidase | C151_contig_644 | C151_contig_644_2378 | 2606370 | 2608748 | - | U69.UPW |
| TC | C151_contig_644 | C151_contig_644_2379 | 2609049 | 2610734 | - | 9.B.160.1.10 |
Gene ID: C151_contig_644_2370
Type: TC
Location: 2597563 - 2598267 (-)
Type: TC
Location: 2597563 - 2598267 (-)
Gene ID: C151_contig_644_2371
Type:
Location: 2598602 - 2599036 (-)
Type:
Location: 2598602 - 2599036 (-)
Gene ID: C151_contig_644_2372
Type: pfam
Location: 2599058 - 2600002 (-)
Type: pfam
Location: 2599058 - 2600002 (-)
Gene ID: C151_contig_644_2373
Type: CAZyme
Location: 2599999 - 2601150 (-)
Type: CAZyme
Location: 2599999 - 2601150 (-)
Gene ID: C151_contig_644_2374
Type: CAZyme
Location: 2601143 - 2602294 (-)
Type: CAZyme
Location: 2601143 - 2602294 (-)
Gene ID: C151_contig_644_2375
Type: pfam
Location: 2602388 - 2603422 (-)
Type: pfam
Location: 2602388 - 2603422 (-)
Gene ID: C151_contig_644_2376
Type: pfam
Location: 2603470 - 2604546 (-)
Type: pfam
Location: 2603470 - 2604546 (-)
Gene ID: C151_contig_644_2377
Type: TC
Location: 2604543 - 2606141 (-)
Type: TC
Location: 2604543 - 2606141 (-)
Gene ID: C151_contig_644_2378
Type: peptidase
Location: 2606370 - 2608748 (-)
Type: peptidase
Location: 2606370 - 2608748 (-)
Gene ID: C151_contig_644_2379
Type: TC
Location: 2609049 - 2610734 (-)
Type: TC
Location: 2609049 - 2610734 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_2370 | vegan > omnivore | 1.56500 | 0.00168 |
| C151_contig_644_2370 | vegetarian > omnivore | 1.51755 | 0.00397 |
| C151_contig_644_2372 | vegan > omnivore | 1.95347 | 0.00168 |
| C151_contig_644_2372 | vegetarian > omnivore | 1.90309 | 0.00397 |
| C151_contig_644_2373 | vegan > omnivore | 1.46876 | 0.00168 |
| C151_contig_644_2373 | vegetarian > omnivore | 1.29621 | 0.00397 |
| C151_contig_644_2374 | vegan > omnivore | 1.05117 | 0.00168 |
| C151_contig_644_2374 | vegetarian > omnivore | 1.08658 | 0.00397 |
| C151_contig_644_2377 | vegan > omnivore | 1.01842 | 0.00168 |
| C151_contig_644_2377 | vegetarian > omnivore | 1.58048 | 0.00397 |
| C151_contig_644_2378 | vegan > omnivore | 1.80851 | 0.00168 |
| C151_contig_644_2378 | vegetarian > omnivore | 2.44611 | 0.00397 |
| C151_contig_644_2379 | vegan > omnivore | 1.46887 | 0.00168 |
| C151_contig_644_2379 | vegetarian > omnivore | 1.62804 | 0.00397 |