Cluster: C151.CMAG_2_CGC37
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_07934
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C151_contig_644 | C151_contig_644_2495 | 2751957 | 2752784 | + | GT111 |
| CAZyme | C151_contig_644 | C151_contig_644_2496 | 2752784 | 2753749 | + | GT2 |
| pfam | C151_contig_644 | C151_contig_644_2497 | 2753856 | 2755016 | + | Glyphos_transf |
| CAZyme | C151_contig_644 | C151_contig_644_2498 | 2755018 | 2755962 | + | GT32 |
| pfam | C151_contig_644 | C151_contig_644_2499 | 2755943 | 2756749 | + | LicD |
| pfam | C151_contig_644 | C151_contig_644_2500 | 2756765 | 2757481 | + | NTP_transferase | IspD | NTP_transf_3 |
| CAZyme | C151_contig_644 | C151_contig_644_2501 | 2757500 | 2758567 | + | GT113 |
| NULL(UNKNOWN) | C151_contig_644 | C151_contig_644_2502 | 2758605 | 2759954 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | C151_contig_644 | C151_contig_644_2503 | 2759967 | 2761418 | + | 2.A.66.2.16 |
Gene ID: C151_contig_644_2495
Type: CAZyme
Location: 2751957 - 2752784 (+)
Type: CAZyme
Location: 2751957 - 2752784 (+)
Gene ID: C151_contig_644_2496
Type: CAZyme
Location: 2752784 - 2753749 (+)
Type: CAZyme
Location: 2752784 - 2753749 (+)
Gene ID: C151_contig_644_2497
Type: pfam
Location: 2753856 - 2755016 (+)
Type: pfam
Location: 2753856 - 2755016 (+)
Gene ID: C151_contig_644_2498
Type: CAZyme
Location: 2755018 - 2755962 (+)
Type: CAZyme
Location: 2755018 - 2755962 (+)
Gene ID: C151_contig_644_2499
Type: pfam
Location: 2755943 - 2756749 (+)
Type: pfam
Location: 2755943 - 2756749 (+)
Gene ID: C151_contig_644_2500
Type: pfam
Location: 2756765 - 2757481 (+)
Type: pfam
Location: 2756765 - 2757481 (+)
Gene ID: C151_contig_644_2501
Type: CAZyme
Location: 2757500 - 2758567 (+)
Type: CAZyme
Location: 2757500 - 2758567 (+)
Gene ID: C151_contig_644_2502
Type:
Location: 2758605 - 2759954 (+)
Type:
Location: 2758605 - 2759954 (+)
Gene ID: C151_contig_644_2503
Type: TC
Location: 2759967 - 2761418 (+)
Type: TC
Location: 2759967 - 2761418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_2495 | vegan > omnivore | 2.64891 | 0.00168 |
| C151_contig_644_2496 | vegan > omnivore | 1.30486 | 0.00168 |
| C151_contig_644_2497 | vegan > omnivore | 1.36021 | 0.00168 |