Cluster: C151.CMAG_2_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_06784
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_298 | 332007 | 333683 | + | 3.A.11.1.3 |
| TC | C151_contig_644 | C151_contig_644_299 | 333708 | 334757 | + | 3.A.15.2.1 |
| pfam | C151_contig_644 | C151_contig_644_300 | 334806 | 338828 | + | N_methyl |
| TC | C151_contig_644 | C151_contig_644_301 | 338893 | 339678 | - | 3.A.15.3.1 |
| pfam | C151_contig_644 | C151_contig_644_302 | 339895 | 340476 | + | PTAC |
| CAZyme | C151_contig_644 | C151_contig_644_303 | 340571 | 342703 | + | CBM79 | CBM79 | GH5_4 |
| TC | C151_contig_644 | C151_contig_644_304 | 342889 | 343503 | + | 2.A.115.2.14 |
Gene ID: C151_contig_644_298
Type: TC
Location: 332007 - 333683 (+)
Type: TC
Location: 332007 - 333683 (+)
Gene ID: C151_contig_644_299
Type: TC
Location: 333708 - 334757 (+)
Type: TC
Location: 333708 - 334757 (+)
Gene ID: C151_contig_644_300
Type: pfam
Location: 334806 - 338828 (+)
Type: pfam
Location: 334806 - 338828 (+)
Gene ID: C151_contig_644_301
Type: TC
Location: 338893 - 339678 (-)
Type: TC
Location: 338893 - 339678 (-)
Gene ID: C151_contig_644_302
Type: pfam
Location: 339895 - 340476 (+)
Type: pfam
Location: 339895 - 340476 (+)
Gene ID: C151_contig_644_303
Type: CAZyme
Location: 340571 - 342703 (+)
Type: CAZyme
Location: 340571 - 342703 (+)
Gene ID: C151_contig_644_304
Type: TC
Location: 342889 - 343503 (+)
Type: TC
Location: 342889 - 343503 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_298 | vegan > omnivore | 1.16197 | 0.00168 |
| C151_contig_644_298 | vegetarian > omnivore | 1.25985 | 0.00397 |
| C151_contig_644_299 | vegan > omnivore | 1.81301 | 0.00168 |
| C151_contig_644_299 | vegetarian > omnivore | 1.46473 | 0.00397 |
| C151_contig_644_301 | vegan > omnivore | 1.66530 | 0.00168 |
| C151_contig_644_301 | vegetarian > omnivore | 1.83402 | 0.00397 |
| C151_contig_644_302 | vegan > omnivore | 1.42706 | 0.00168 |
| C151_contig_644_302 | vegetarian > omnivore | 1.32095 | 0.00397 |
| C151_contig_644_303 | vegan > omnivore | 1.95370 | 0.00168 |
| C151_contig_644_303 | vegetarian > omnivore | 2.05471 | 0.00397 |
| C151_contig_644_304 | vegan > omnivore | 1.63344 | 0.00168 |
| C151_contig_644_304 | vegetarian > omnivore | 1.08474 | 0.00397 |