Cluster: C151.CMAG_2_CGC22
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_04445
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_1788 | 1889722 | 1890780 | - | 3.A.1.6.3 |
| TC | C151_contig_644 | C151_contig_644_1789 | 1890780 | 1891601 | - | 3.A.1.6.1 |
| TC | C151_contig_644 | C151_contig_644_1790 | 1891603 | 1892436 | - | 3.A.1.6.1 |
| TC | C151_contig_644 | C151_contig_644_1791 | 1892446 | 1893453 | - | 3.A.1.6.1 |
| pfam | C151_contig_644 | C151_contig_644_1792 | 1893768 | 1895324 | + | SipL | SipL |
| pfam | C151_contig_644 | C151_contig_644_1793 | 1895345 | 1896820 | + | SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C |
| TC | C151_contig_644 | C151_contig_644_1794 | 1896927 | 1897439 | - | 4.A.1.1.12 |
| STP | C151_contig_644 | C151_contig_644_1795 | 1897446 | 1898048 | - | PfkB |
| STP | C151_contig_644 | C151_contig_644_1796 | 1898067 | 1898429 | - | PfkB |
| CAZyme | C151_contig_644 | C151_contig_644_1797 | 1898431 | 1899879 | - | GH32 |
| TC | C151_contig_644 | C151_contig_644_1798 | 1899895 | 1901310 | - | 4.A.1.2.9 |
Gene ID: C151_contig_644_1788
Type: TC
Location: 1889722 - 1890780 (-)
Type: TC
Location: 1889722 - 1890780 (-)
Gene ID: C151_contig_644_1789
Type: TC
Location: 1890780 - 1891601 (-)
Type: TC
Location: 1890780 - 1891601 (-)
Gene ID: C151_contig_644_1790
Type: TC
Location: 1891603 - 1892436 (-)
Type: TC
Location: 1891603 - 1892436 (-)
Gene ID: C151_contig_644_1791
Type: TC
Location: 1892446 - 1893453 (-)
Type: TC
Location: 1892446 - 1893453 (-)
Gene ID: C151_contig_644_1792
Type: pfam
Location: 1893768 - 1895324 (+)
Type: pfam
Location: 1893768 - 1895324 (+)
Gene ID: C151_contig_644_1793
Type: pfam
Location: 1895345 - 1896820 (+)
Type: pfam
Location: 1895345 - 1896820 (+)
Gene ID: C151_contig_644_1794
Type: TC
Location: 1896927 - 1897439 (-)
Type: TC
Location: 1896927 - 1897439 (-)
Gene ID: C151_contig_644_1795
Type: STP
Location: 1897446 - 1898048 (-)
Type: STP
Location: 1897446 - 1898048 (-)
Gene ID: C151_contig_644_1796
Type: STP
Location: 1898067 - 1898429 (-)
Type: STP
Location: 1898067 - 1898429 (-)
Gene ID: C151_contig_644_1797
Type: CAZyme
Location: 1898431 - 1899879 (-)
Type: CAZyme
Location: 1898431 - 1899879 (-)
Gene ID: C151_contig_644_1798
Type: TC
Location: 1899895 - 1901310 (-)
Type: TC
Location: 1899895 - 1901310 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_1788 | vegetarian > omnivore | 1.00730 | 0.00397 |
| C151_contig_644_1789 | vegan > omnivore | 1.38157 | 0.00168 |
| C151_contig_644_1790 | vegan > omnivore | 1.64505 | 0.00168 |
| C151_contig_644_1790 | vegetarian > omnivore | 1.14083 | 0.00397 |
| C151_contig_644_1791 | vegan > omnivore | 1.37711 | 0.00168 |
| C151_contig_644_1792 | vegan > omnivore | 1.37990 | 0.00168 |
| C151_contig_644_1792 | vegetarian > omnivore | 1.06668 | 0.00397 |