Cluster: C151.CMAG_2_CGC18
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_06783
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C151_contig_644 | C151_contig_644_1570 | 1642955 | 1644262 | - | CE3 |
| pfam | C151_contig_644 | C151_contig_644_1571 | 1644277 | 1645527 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | C151_contig_644 | C151_contig_644_1572 | 1645771 | 1648326 | + | CBM76 | GH44 |
| pfam | C151_contig_644 | C151_contig_644_1573 | 1648389 | 1650635 | - | DNA_topoisoIV |
| STP | C151_contig_644 | C151_contig_644_1574 | 1650650 | 1652629 | - | HATPase_c |
| CAZyme | C151_contig_644 | C151_contig_644_1575 | 1653366 | 1655171 | - | GH5_4 |
| TF | C151_contig_644 | C151_contig_644_1576 | 1655398 | 1656087 | - | GntR |
| TC | C151_contig_644 | C151_contig_644_1577 | 1656096 | 1656788 | - | 2.A.122.1.4 |
| TC | C151_contig_644 | C151_contig_644_1578 | 1656781 | 1657152 | - | 1.E.14.1.15 |
| TC | C151_contig_644 | C151_contig_644_1579 | 1657297 | 1658679 | - | 2.A.66.1.33 |
| TC | C151_contig_644 | C151_contig_644_1580 | 1659419 | 1661725 | - | 3.A.9.1.2 |
Gene ID: C151_contig_644_1570
Type: CAZyme
Location: 1642955 - 1644262 (-)
Type: CAZyme
Location: 1642955 - 1644262 (-)
Gene ID: C151_contig_644_1571
Type: pfam
Location: 1644277 - 1645527 (-)
Type: pfam
Location: 1644277 - 1645527 (-)
Gene ID: C151_contig_644_1572
Type: CAZyme
Location: 1645771 - 1648326 (+)
Type: CAZyme
Location: 1645771 - 1648326 (+)
Gene ID: C151_contig_644_1573
Type: pfam
Location: 1648389 - 1650635 (-)
Type: pfam
Location: 1648389 - 1650635 (-)
Gene ID: C151_contig_644_1574
Type: STP
Location: 1650650 - 1652629 (-)
Type: STP
Location: 1650650 - 1652629 (-)
Gene ID: C151_contig_644_1575
Type: CAZyme
Location: 1653366 - 1655171 (-)
Type: CAZyme
Location: 1653366 - 1655171 (-)
Gene ID: C151_contig_644_1576
Type: TF
Location: 1655398 - 1656087 (-)
Type: TF
Location: 1655398 - 1656087 (-)
Gene ID: C151_contig_644_1577
Type: TC
Location: 1656096 - 1656788 (-)
Type: TC
Location: 1656096 - 1656788 (-)
Gene ID: C151_contig_644_1578
Type: TC
Location: 1656781 - 1657152 (-)
Type: TC
Location: 1656781 - 1657152 (-)
Gene ID: C151_contig_644_1579
Type: TC
Location: 1657297 - 1658679 (-)
Type: TC
Location: 1657297 - 1658679 (-)
Gene ID: C151_contig_644_1580
Type: TC
Location: 1659419 - 1661725 (-)
Type: TC
Location: 1659419 - 1661725 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_1570 | vegan > omnivore | 1.06257 | 0.00168 |
| C151_contig_644_1575 | vegan > omnivore | 2.13214 | 0.00168 |
| C151_contig_644_1575 | vegetarian > omnivore | 1.48270 | 0.00397 |
| C151_contig_644_1578 | vegan > omnivore | 1.11408 | 0.00168 |
| C151_contig_644_1579 | vegan > omnivore | 1.21048 | 0.00168 |
| C151_contig_644_1579 | vegetarian > omnivore | 1.02177 | 0.00397 |