Cluster: C151.CMAG_2_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_03130
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | C151_contig_644 | C151_contig_644_1020 | 1080760 | 1081722 | + | 3.A.1.1.28 |
| TC | C151_contig_644 | C151_contig_644_1021 | 1081719 | 1082570 | + | 3.A.1.1.27 |
| CAZyme | C151_contig_644 | C151_contig_644_1022 | 1082588 | 1083607 | + | GH130_2 |
| pfam | C151_contig_644 | C151_contig_644_1023 | 1083810 | 1084982 | + | GlcNAc_2-epim |
| CAZyme | C151_contig_644 | C151_contig_644_1024 | 1084995 | 1086167 | + | GH130_1 |
| CAZyme | C151_contig_644 | C151_contig_644_1025 | 1086246 | 1089065 | + | CBM23 | GH5_7 |
| CAZyme | C151_contig_644 | C151_contig_644_1026 | 1089080 | 1091566 | + | CBM23 | GH5_7 |
Gene ID: C151_contig_644_1020
Type: TC
Location: 1080760 - 1081722 (+)
Type: TC
Location: 1080760 - 1081722 (+)
Gene ID: C151_contig_644_1021
Type: TC
Location: 1081719 - 1082570 (+)
Type: TC
Location: 1081719 - 1082570 (+)
Gene ID: C151_contig_644_1022
Type: CAZyme
Location: 1082588 - 1083607 (+)
Type: CAZyme
Location: 1082588 - 1083607 (+)
Gene ID: C151_contig_644_1023
Type: pfam
Location: 1083810 - 1084982 (+)
Type: pfam
Location: 1083810 - 1084982 (+)
Gene ID: C151_contig_644_1024
Type: CAZyme
Location: 1084995 - 1086167 (+)
Type: CAZyme
Location: 1084995 - 1086167 (+)
Gene ID: C151_contig_644_1025
Type: CAZyme
Location: 1086246 - 1089065 (+)
Type: CAZyme
Location: 1086246 - 1089065 (+)
Gene ID: C151_contig_644_1026
Type: CAZyme
Location: 1089080 - 1091566 (+)
Type: CAZyme
Location: 1089080 - 1091566 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_1020 | vegan > omnivore | 1.28908 | 0.00168 |
| C151_contig_644_1021 | vegan > omnivore | 1.84216 | 0.00168 |
| C151_contig_644_1021 | vegetarian > omnivore | 1.53982 | 0.00397 |
| C151_contig_644_1025 | vegan > omnivore | 1.50640 | 0.00168 |
| C151_contig_644_1025 | vegetarian > omnivore | 1.16919 | 0.00397 |
| C151_contig_644_1026 | vegan > omnivore | 1.22189 | 0.00168 |