Cluster: C151.CMAG_2_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: C151.CMAG_2
- CGC Family ID: CGCFAM_01574
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | C151_contig_644 | C151_contig_644_2205 | 2397985 | 2399508 | - | CE20 |
| pfam | C151_contig_644 | C151_contig_644_2206 | 2399867 | 2400469 | + | Flavin_Reduct |
| peptidase | C151_contig_644 | C151_contig_644_2207 | 2400856 | 2401548 | + | S14.UPW |
| TC | C151_contig_644 | C151_contig_644_2208 | 2401635 | 2404265 | + | 3.A.12.1.1 |
| pfam | C151_contig_644 | C151_contig_644_2209 | 2404421 | 2406319 | + | Radical_SAM_N | DUF3362 |
| TC | C151_contig_644 | C151_contig_644_2210 | 2406478 | 2407242 | + | 3.A.11.1.4 |
Gene ID: C151_contig_644_2205
Type: CAZyme
Location: 2397985 - 2399508 (-)
Type: CAZyme
Location: 2397985 - 2399508 (-)
Gene ID: C151_contig_644_2206
Type: pfam
Location: 2399867 - 2400469 (+)
Type: pfam
Location: 2399867 - 2400469 (+)
Gene ID: C151_contig_644_2207
Type: peptidase
Location: 2400856 - 2401548 (+)
Type: peptidase
Location: 2400856 - 2401548 (+)
Gene ID: C151_contig_644_2208
Type: TC
Location: 2401635 - 2404265 (+)
Type: TC
Location: 2401635 - 2404265 (+)
Gene ID: C151_contig_644_2209
Type: pfam
Location: 2404421 - 2406319 (+)
Type: pfam
Location: 2404421 - 2406319 (+)
Gene ID: C151_contig_644_2210
Type: TC
Location: 2406478 - 2407242 (+)
Type: TC
Location: 2406478 - 2407242 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp000980705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| C151_contig_644_2205 | vegan > omnivore | 1.44648 | 0.00168 |
| C151_contig_644_2205 | vegetarian > omnivore | 1.72565 | 0.00397 |
| C151_contig_644_2206 | vegan > omnivore | 1.64915 | 0.00168 |
| C151_contig_644_2206 | vegetarian > omnivore | 1.39076 | 0.00397 |
| C151_contig_644_2207 | vegan > omnivore | 1.10495 | 0.00168 |
| C151_contig_644_2210 | vegan > omnivore | 1.63987 | 0.00168 |
| C151_contig_644_2210 | vegetarian > omnivore | 1.90888 | 0.00397 |