Genome Details
Selected Rep_genome_ID: A129.bin_2
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A129.bin_2 | 2,966,168 | 100% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR085402 | 2,685,512 | 100% | 0% | China | Asia | CGMR |
| SPMP103_bin.38 | 2,831,227 | 94.97% | 0% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| A129.bin_2_CGC12 | CGCFAM_00020 | Yes | 7 | 1 | host glycan/beta-glucan |
| A129.bin_2_CGC18 | CGCFAM_00027 | Yes | 4 | 1 | |
| A129.bin_2_CGC7 | CGCFAM_00051 | Yes | 3 | 1 | |
| A129.bin_2_CGC9 | CGCFAM_00092 | Yes | 7 | 1 | |
| A129.bin_2_CGC5 | CGCFAM_00163 | Yes | 4 | 1 | |
| A129.bin_2_CGC10 | CGCFAM_00548 | Yes | 15 | 4 | |
| A129.bin_2_CGC20 | CGCFAM_00852 | Yes | 3 | 1 | |
| A129.bin_2_CGC23 | CGCFAM_01820 | Yes | 5 | 2 | |
| A129.bin_2_CGC3 | CGCFAM_01861 | Yes | 8 | 2 | |
| A129.bin_2_CGC6 | CGCFAM_02287 | Yes | 3 | 2 | |
| A129.bin_2_CGC16 | CGCFAM_02348 | Yes | 6 | 1 | |
| A129.bin_2_CGC26 | CGCFAM_03022 | Yes | 3 | 1 | |
| A129.bin_2_CGC4 | CGCFAM_04283 | Yes | 3 | 1 | |
| A129.bin_2_CGC2 | CGCFAM_06600 | Yes | 5 | 1 | |
| A129.bin_2_CGC21 | CGCFAM_06603 | Yes | 4 | 2 | |
| A129.bin_2_CGC24 | CGCFAM_06604 | Yes | 4 | 1 |
Top CAZyme Families