Cluster: A129.bin_2_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_01820
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_223 | A129_contig_223_1664 | 1828984 | 1830273 | + | 4.A.3.1.2 |
| pfam | A129_contig_223 | A129_contig_223_1665 | 1830289 | 1830618 | + | PTS_IIA |
| CAZyme | A129_contig_223 | A129_contig_223_1666 | 1830620 | 1832053 | + | GH1 |
| pfam | A129_contig_223 | A129_contig_223_1667 | 1832230 | 1833396 | - | DEDD_Tnp_IS110 | Transposase_20 |
| CAZyme | A129_contig_223 | A129_contig_223_1668 | 1833672 | 1835123 | + | GH1 |
Gene ID: A129_contig_223_1664
Type: TC
Location: 1828984 - 1830273 (+)
Type: TC
Location: 1828984 - 1830273 (+)
Gene ID: A129_contig_223_1665
Type: pfam
Location: 1830289 - 1830618 (+)
Type: pfam
Location: 1830289 - 1830618 (+)
Gene ID: A129_contig_223_1666
Type: CAZyme
Location: 1830620 - 1832053 (+)
Type: CAZyme
Location: 1830620 - 1832053 (+)
Gene ID: A129_contig_223_1667
Type: pfam
Location: 1832230 - 1833396 (-)
Type: pfam
Location: 1832230 - 1833396 (-)
Gene ID: A129_contig_223_1668
Type: CAZyme
Location: 1833672 - 1835123 (+)
Type: CAZyme
Location: 1833672 - 1835123 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.