Cluster: A129.bin_2_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_06603
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_223 | A129_contig_223_1594 | 1752043 | 1753404 | + | GH3 |
| CAZyme | A129_contig_223 | A129_contig_223_1595 | 1753567 | 1754961 | - | CE4 |
| pfam | A129_contig_223 | A129_contig_223_1596 | 1755226 | 1756437 | - | TGT |
| TC | A129_contig_223 | A129_contig_223_1597 | 1756434 | 1757069 | - | 2.A.88.8.2 |
Gene ID: A129_contig_223_1594
Type: CAZyme
Location: 1752043 - 1753404 (+)
Type: CAZyme
Location: 1752043 - 1753404 (+)
Gene ID: A129_contig_223_1595
Type: CAZyme
Location: 1753567 - 1754961 (-)
Type: CAZyme
Location: 1753567 - 1754961 (-)
Gene ID: A129_contig_223_1596
Type: pfam
Location: 1755226 - 1756437 (-)
Type: pfam
Location: 1755226 - 1756437 (-)
Gene ID: A129_contig_223_1597
Type: TC
Location: 1756434 - 1757069 (-)
Type: TC
Location: 1756434 - 1757069 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.