Cluster: A129.bin_2_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_00020
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_223 | A129_contig_223_687 | 805272 | 805841 | - | 2.A.88.6.1 |
| sulfatase | A129_contig_223 | A129_contig_223_688 | 805859 | 806830 | - | S1_46 |
| CAZyme | A129_contig_223 | A129_contig_223_689 | 807309 | 808715 | - | GH1 |
| TC | A129_contig_223 | A129_contig_223_690 | 808729 | 810126 | - | 4.A.1.2.11 |
| pfam | A129_contig_223 | A129_contig_223_691 | 810205 | 810417 | - | PRD |
| pfam | A129_contig_223 | A129_contig_223_692 | 810592 | 811035 | - | PRD | CAT_RBD |
| TC | A129_contig_223 | A129_contig_223_693 | 811067 | 811537 | - | 4.A.3.2.5 |
Gene ID: A129_contig_223_687
Type: TC
Location: 805272 - 805841 (-)
Type: TC
Location: 805272 - 805841 (-)
Gene ID: A129_contig_223_688
Type: sulfatase
Location: 805859 - 806830 (-)
Type: sulfatase
Location: 805859 - 806830 (-)
Gene ID: A129_contig_223_689
Type: CAZyme
Location: 807309 - 808715 (-)
Type: CAZyme
Location: 807309 - 808715 (-)
Gene ID: A129_contig_223_690
Type: TC
Location: 808729 - 810126 (-)
Type: TC
Location: 808729 - 810126 (-)
Gene ID: A129_contig_223_691
Type: pfam
Location: 810205 - 810417 (-)
Type: pfam
Location: 810205 - 810417 (-)
Gene ID: A129_contig_223_692
Type: pfam
Location: 810592 - 811035 (-)
Type: pfam
Location: 810592 - 811035 (-)
Gene ID: A129_contig_223_693
Type: TC
Location: 811067 - 811537 (-)
Type: TC
Location: 811067 - 811537 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.