Cluster: A129.bin_2_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_06604
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_223 | A129_contig_223_1908 | 2102852 | 2104684 | + | 3.A.1.111.2 |
| TC | A129_contig_223 | A129_contig_223_1909 | 2104635 | 2106461 | + | 3.A.1.21.1 |
| TF | A129_contig_223 | A129_contig_223_1910 | 2106554 | 2107693 | + | HTH_5 |
| CAZyme | A129_contig_223 | A129_contig_223_1911 | 2107725 | 2108852 | + | CE9 |
Gene ID: A129_contig_223_1908
Type: TC
Location: 2102852 - 2104684 (+)
Type: TC
Location: 2102852 - 2104684 (+)
Gene ID: A129_contig_223_1909
Type: TC
Location: 2104635 - 2106461 (+)
Type: TC
Location: 2104635 - 2106461 (+)
Gene ID: A129_contig_223_1910
Type: TF
Location: 2106554 - 2107693 (+)
Type: TF
Location: 2106554 - 2107693 (+)
Gene ID: A129_contig_223_1911
Type: CAZyme
Location: 2107725 - 2108852 (+)
Type: CAZyme
Location: 2107725 - 2108852 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.