Cluster: A129.bin_2_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_00852
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_223 | A129_contig_223_1438 | 1607207 | 1609066 | + | CBM48 | GH13_9 |
| pfam | A129_contig_223 | A129_contig_223_1439 | 1609339 | 1609758 | + | Ribosomal_L11 | Ribosomal_L11_N |
| TC | A129_contig_223 | A129_contig_223_1440 | 1609781 | 1610467 | + | 1.C.82.1.1 |
Gene ID: A129_contig_223_1438
Type: CAZyme
Location: 1607207 - 1609066 (+)
Type: CAZyme
Location: 1607207 - 1609066 (+)
Gene ID: A129_contig_223_1439
Type: pfam
Location: 1609339 - 1609758 (+)
Type: pfam
Location: 1609339 - 1609758 (+)
Gene ID: A129_contig_223_1440
Type: TC
Location: 1609781 - 1610467 (+)
Type: TC
Location: 1609781 - 1610467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.