Cluster: A129.bin_2_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_06600
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_223 | A129_contig_223_206 | 219564 | 220637 | - | GT28 |
| TC | A129_contig_223 | A129_contig_223_207 | 220703 | 221785 | - | 2.A.103.1.3 |
| peptidase | A129_contig_223 | A129_contig_223_208 | 221937 | 222731 | - | C60.002 |
| TF | A129_contig_223 | A129_contig_223_209 | 223060 | 223326 | + | HTH_5 |
| TC | A129_contig_223 | A129_contig_223_210 | 223420 | 224256 | + | 3.A.1.147.6 |
Gene ID: A129_contig_223_206
Type: CAZyme
Location: 219564 - 220637 (-)
Type: CAZyme
Location: 219564 - 220637 (-)
Gene ID: A129_contig_223_207
Type: TC
Location: 220703 - 221785 (-)
Type: TC
Location: 220703 - 221785 (-)
Gene ID: A129_contig_223_208
Type: peptidase
Location: 221937 - 222731 (-)
Type: peptidase
Location: 221937 - 222731 (-)
Gene ID: A129_contig_223_209
Type: TF
Location: 223060 - 223326 (+)
Type: TF
Location: 223060 - 223326 (+)
Gene ID: A129_contig_223_210
Type: TC
Location: 223420 - 224256 (+)
Type: TC
Location: 223420 - 224256 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.