Cluster: A129.bin_2_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_02348
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_223 | A129_contig_223_942 | 1076879 | 1077583 | - | 3.A.1.4.10 |
| TC | A129_contig_223 | A129_contig_223_943 | 1077586 | 1078362 | - | 3.A.1.4.10 |
| TC | A129_contig_223 | A129_contig_223_944 | 1078364 | 1079320 | - | 3.A.1.4.10 |
| TC | A129_contig_223 | A129_contig_223_945 | 1079334 | 1080215 | - | 3.A.1.4.10 |
| TC | A129_contig_223 | A129_contig_223_946 | 1080312 | 1081508 | - | 3.A.1.4.10 |
| CAZyme | A129_contig_223 | A129_contig_223_947 | 1081822 | 1088493 | - | CBM32 | GH31_18 |
Gene ID: A129_contig_223_942
Type: TC
Location: 1076879 - 1077583 (-)
Type: TC
Location: 1076879 - 1077583 (-)
Gene ID: A129_contig_223_943
Type: TC
Location: 1077586 - 1078362 (-)
Type: TC
Location: 1077586 - 1078362 (-)
Gene ID: A129_contig_223_944
Type: TC
Location: 1078364 - 1079320 (-)
Type: TC
Location: 1078364 - 1079320 (-)
Gene ID: A129_contig_223_945
Type: TC
Location: 1079334 - 1080215 (-)
Type: TC
Location: 1079334 - 1080215 (-)
Gene ID: A129_contig_223_946
Type: TC
Location: 1080312 - 1081508 (-)
Type: TC
Location: 1080312 - 1081508 (-)
Gene ID: A129_contig_223_947
Type: CAZyme
Location: 1081822 - 1088493 (-)
Type: CAZyme
Location: 1081822 - 1088493 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.