Cluster: A129.bin_2_CGC10
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_00548
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_223 | A129_contig_223_623 | 739223 | 740668 | - | 2.A.66.2.16 |
| CAZyme | A129_contig_223 | A129_contig_223_624 | 740688 | 741584 | - | GT2 |
| CAZyme | A129_contig_223 | A129_contig_223_625 | 741608 | 742567 | - | GT2 |
| NULL(UNKNOWN) | A129_contig_223 | A129_contig_223_626 | 742536 | 743870 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A129_contig_223 | A129_contig_223_627 | 743876 | 744847 | - | GT2 |
| NULL(UNKNOWN) | A129_contig_223 | A129_contig_223_628 | 744822 | 745628 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A129_contig_223 | A129_contig_223_629 | 745612 | 746778 | - | UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | A129_contig_223 | A129_contig_223_630 | 746775 | 747545 | - | GT2 |
| TC | A129_contig_223 | A129_contig_223_631 | 747558 | 748253 | - | 9.B.18.1.3 |
| pfam | A129_contig_223 | A129_contig_223_632 | 748244 | 749473 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| TC | A129_contig_223 | A129_contig_223_633 | 749470 | 751347 | - | 9.B.18.2.1 |
| TC | A129_contig_223 | A129_contig_223_634 | 751583 | 751771 | - | 3.A.1.135.7 |
| NULL(UNKNOWN) | A129_contig_223 | A129_contig_223_635 | 751880 | 752737 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A129_contig_223 | A129_contig_223_636 | 753926 | 755707 | - | 3.A.1.135.7 |
| TC | A129_contig_223 | A129_contig_223_637 | 755694 | 757433 | - | 3.A.1.135.7 |
Gene ID: A129_contig_223_623
Type: TC
Location: 739223 - 740668 (-)
Type: TC
Location: 739223 - 740668 (-)
Gene ID: A129_contig_223_624
Type: CAZyme
Location: 740688 - 741584 (-)
Type: CAZyme
Location: 740688 - 741584 (-)
Gene ID: A129_contig_223_625
Type: CAZyme
Location: 741608 - 742567 (-)
Type: CAZyme
Location: 741608 - 742567 (-)
Gene ID: A129_contig_223_626
Type:
Location: 742536 - 743870 (-)
Type:
Location: 742536 - 743870 (-)
Gene ID: A129_contig_223_627
Type: CAZyme
Location: 743876 - 744847 (-)
Type: CAZyme
Location: 743876 - 744847 (-)
Gene ID: A129_contig_223_628
Type:
Location: 744822 - 745628 (-)
Type:
Location: 744822 - 745628 (-)
Gene ID: A129_contig_223_629
Type: pfam
Location: 745612 - 746778 (-)
Type: pfam
Location: 745612 - 746778 (-)
Gene ID: A129_contig_223_630
Type: CAZyme
Location: 746775 - 747545 (-)
Type: CAZyme
Location: 746775 - 747545 (-)
Gene ID: A129_contig_223_631
Type: TC
Location: 747558 - 748253 (-)
Type: TC
Location: 747558 - 748253 (-)
Gene ID: A129_contig_223_632
Type: pfam
Location: 748244 - 749473 (-)
Type: pfam
Location: 748244 - 749473 (-)
Gene ID: A129_contig_223_633
Type: TC
Location: 749470 - 751347 (-)
Type: TC
Location: 749470 - 751347 (-)
Gene ID: A129_contig_223_634
Type: TC
Location: 751583 - 751771 (-)
Type: TC
Location: 751583 - 751771 (-)
Gene ID: A129_contig_223_635
Type:
Location: 751880 - 752737 (+)
Type:
Location: 751880 - 752737 (+)
Gene ID: A129_contig_223_636
Type: TC
Location: 753926 - 755707 (-)
Type: TC
Location: 753926 - 755707 (-)
Gene ID: A129_contig_223_637
Type: TC
Location: 755694 - 757433 (-)
Type: TC
Location: 755694 - 757433 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.