Cluster: A129.bin_2_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_2
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_223 | A129_contig_223_1266 | 1429436 | 1430833 | + | 4.A.1.2.11 |
| NULL(UNKNOWN) | A129_contig_223 | A129_contig_223_1267 | 1430848 | 1431900 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | A129_contig_223 | A129_contig_223_1268 | 1431912 | 1433372 | + | GH1 |
| TC | A129_contig_223 | A129_contig_223_1269 | 1433454 | 1433936 | + | 4.A.1.1.1 |
Gene ID: A129_contig_223_1266
Type: TC
Location: 1429436 - 1430833 (+)
Type: TC
Location: 1429436 - 1430833 (+)
Gene ID: A129_contig_223_1267
Type:
Location: 1430848 - 1431900 (+)
Type:
Location: 1430848 - 1431900 (+)
Gene ID: A129_contig_223_1268
Type: CAZyme
Location: 1431912 - 1433372 (+)
Type: CAZyme
Location: 1431912 - 1433372 (+)
Gene ID: A129_contig_223_1269
Type: TC
Location: 1433454 - 1433936 (+)
Type: TC
Location: 1433454 - 1433936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Longicatena
Species
Longicatena caecimuris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.