y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g038885m |
Family | GT47 |
Protein Properties | Length: 407 Molecular Weight: 46046.2 Isoelectric Point: 6.671 |
Chromosome | Chromosome/Scaffold: 00081 Start: 125088 End: 127977 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 39 | 334 | 0 |
KLKVYVYELPSKYNKKLLLKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPIYPTCDLTPTGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGA DHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQRNHVCLNEGSITIPPYAPPQKMQAHQIPPDTPRSIFVYFRGLFYDVNNDPEGGYYARGA RAAVWENFKNNPLFDISTDHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGMFVAEEDVPKLDTILTSI |
Full Sequence |
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Protein Sequence Length: 407 Download |
MWVTAIALLL AFVSADNTPK IERISGSAGD VLEDDPVGKL KVYVYELPSK YNKKLLLKDP 60 RCLTHMFAAE IFMHRFLLSS PVRTLNPEEA DWFYTPIYPT CDLTPTGLPL PFKSPRMMRS 120 AIQLISSNWP YWNRTEGADH FFVVPHDFGA CFHYQEEKAI ERGILPLLQR ATLVQTFGQR 180 NHVCLNEGSI TIPPYAPPQK MQAHQIPPDT PRSIFVYFRG LFYDVNNDPE GGYYARGARA 240 AVWENFKNNP LFDISTDHPT TYYEDMQRAI FCLCPLGWAP WSPRLVEAVV FGCIPVIIAD 300 DIVLPFADAI PWEEIGMFVA EEDVPKLDTI LTSIPPEVIL RKQRLLANPS MKRAMLFPQP 360 AQPGDAFHQI LNGLARKLPH DKSTYLKPGG KFLNWTSGPV GDLKPW* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-81 | 39 | 334 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33320.1 | 0 | 1 | 406 | 5 | 412 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
RefSeq | NP_174064.1 | 0 | 3 | 406 | 7 | 412 | GUT2; catalytic/ glucuronoxylan glucuronosyltransferase [Arabidopsis thaliana] |
RefSeq | XP_002297880.1 | 0 | 1 | 406 | 5 | 412 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002304637.1 | 0 | 14 | 406 | 21 | 413 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511079.1 | 0 | 7 | 406 | 15 | 417 | catalytic, putative [Ricinus communis] |