y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_92.13 |
Family | GT47 |
Protein Properties | Length: 612 Molecular Weight: 68729.2 Isoelectric Point: 7.5673 |
Chromosome | Chromosome/Scaffold: 92 Start: 155934 End: 167828 |
Description | exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 328 | 517 | 6.16571e-44 |
NHSTTAYWADSWDDISSDRRGNHPCFDPAKDLVLPAWKLPDANVLSAKLWARSREQRKTLFYFNGNLGPAYNNGRPEASYSMGIRQKVAEEFGSSPNKEG KLGRQHADDVIVTPLRSQNYHMDLASSIFCGVFPGDGWSGRMEDSVLQGCIPVIVQDGIFLPYENVLNYKSFAVRILEADIPNLINILRG |
Full Sequence |
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Protein Sequence Length: 612 Download |
MNLSSFSLDS NPIAKWAYQA KPTLPPQRRN FVVCSLKPGG ANAGHTIYNA EGKKFALHLV 60 PSGILNEDTL CVIGNGVVVH LPGLFKEIDG LESNDVSCKG RILVSDRAHL LFDFHQVVDG 120 LRESELAKSF IGTTKRGIGP CYSSKMIRNG IRVSDLRHMD VFPQKLDLLL SDAAARFQGF 180 NYTPDMLREE VERYKRYAER LEPFITDTVH FMNESISQKK KILVEGGQAT MLDIDFGTYP 240 FVTSSSPSAG GICTGLGIAP RVVGDLVGVV KAYTTRVGSG PFPTEILGQG GDLLRQSFSW 300 DEGACSAPKE IWSSMMLVHW GNTNSKHNHS TTAYWADSWD DISSDRRGNH PCFDPAKDLV 360 LPAWKLPDAN VLSAKLWARS REQRKTLFYF NGNLGPAYNN GRPEASYSMG IRQKVAEEFG 420 SSPNKEGKLG RQHADDVIVT PLRSQNYHMD LASSIFCGVF PGDGWSGRME DSVLQGCIPV 480 IVQDGIFLPY ENVLNYKSFA VRILEADIPN LINILRGFNE TEIEFKLRNL QKIWQRFLYR 540 DSILLEAERQ KTAFGRVEDW AAKLLELSED DVFATFIQVL HYKLHNDPWR RQFDRRKKEY 600 GLPEECLRRT S* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK01117 | PRK01117 | 3.0e-121 | 39 | 296 | 259 | + adenylosuccinate synthetase; Provisional | ||
PTZ00350 | PTZ00350 | 4.0e-127 | 39 | 296 | 260 | + adenylosuccinate synthetase; Provisional | ||
pfam00709 | Adenylsucc_synt | 4.0e-127 | 39 | 296 | 259 | + Adenylosuccinate synthetase. | ||
smart00788 | Adenylsucc_synt | 9.0e-132 | 39 | 296 | 259 | + Adenylosuccinate synthetase. Adenylosuccinate synthetase plays an important role in purine biosynthesis, by catalyzing the GTP-dependent conversion of IMP and aspartic acid to AMP. Adenylosuccinate synthetase has been characterized from various sources ranging from Escherichia coli (gene purA) to vertebrate tissues. In vertebrates, two isozymes are present - one involved in purine biosynthesis and the other in the purine nucleotide cycle. The crystal structure of adenylosuccinate synthetase from E. coli reveals that the dominant structural element of each monomer of the homodimer is a central beta-sheet of 10 strands. The first nine strands of the sheet are mutually parallel with right-handed crossover connections between the strands. The 10th strand is antiparallel with respect to the first nine strands. In addition, the enzyme has two antiparallel beta-sheets, comprised of two strands and three strands each, 11 alpha-helices and two short 3/10-helices. Further, it has been suggested that the similarities in the GTP-binding domains of the synthetase and the p21ras protein are an example of convergent evolution of two distinct families of GTP-binding proteins. Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana when compared with the known structures from E. coli reveals that the overall fold is very similar to that of the E. coli protein. | ||
PLN02513 | PLN02513 | 0 | 29 | 297 | 269 | + adenylosuccinate synthase |
Gene Ontology | |
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GO Term | Description |
GO:0000287 | magnesium ion binding |
GO:0004019 | adenylosuccinate synthase activity |
GO:0005525 | GTP binding |
GO:0005737 | cytoplasm |
GO:0006164 | purine nucleotide biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80640.1 | 0 | 298 | 601 | 497 | 809 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29877.1 | 0 | 298 | 610 | 509 | 821 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277596.1 | 0 | 298 | 610 | 481 | 793 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 271 | 611 | 456 | 793 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526728.1 | 0 | 298 | 608 | 416 | 726 | catalytic, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1dj2_B | 0 | 29 | 303 | 43 | 320 | A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana |
PDB | 1dj2_A | 0 | 29 | 303 | 43 | 320 | A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana |
PDB | 1dj3_B | 0 | 14 | 297 | 26 | 310 | A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana |
PDB | 1dj3_A | 0 | 14 | 297 | 26 | 310 | A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana |
PDB | 2dgn_A | 0 | 33 | 322 | 59 | 351 | A Chain A, Structures Of Adenylosuccinate Synthetase From Triticum Aestivum And Arabidopsis Thaliana |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
adenosine nucleotides de novo biosynthesis | ADENYLOSUCCINATE-SYNTHASE-RXN | EC-6.3.4.4 | adenylosuccinate synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX126936 | 278 | 29 | 303 | 0 |
HO781677 | 278 | 29 | 303 | 0 |
EV239903 | 271 | 14 | 283 | 0 |
EV527387 | 251 | 29 | 279 | 0 |
EV524718 | 250 | 29 | 278 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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