y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi5g08400.1 |
Family | GT47 |
Protein Properties | Length: 430 Molecular Weight: 47983.3 Isoelectric Point: 6.571 |
Chromosome | Chromosome/Scaffold: 5 Start: 11109050 End: 11111775 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 62 | 356 | 0 |
RLKVFIYDLPRKYNKKMVAKDPRCLNHMFAAEIFMHRFLLSSAVRTLNPKEADWFYAPVYTTCDLTPAGLPLPFKSPRVMRSAIQYISNKWPFWNKTDGA DHFFVVPHDFGACFHYQEEKAIERGILPLLQRATLVQTFGQENHVCLKEGSIIIPPFAPPQKMQAHLIPPDTPRSIFVYFRGLFYDTGNDPEGGYYARGA RASLWENFKNNPLFDISTEHPATYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFIEEKDVPKLDTILTS |
Full Sequence |
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Protein Sequence Length: 430 Download |
MGSSTGWLPV ALLLAAVALS SVLSPPAAAA AEADGADHAV QQHSERISGS AGDVLEDNPV 60 GRLKVFIYDL PRKYNKKMVA KDPRCLNHMF AAEIFMHRFL LSSAVRTLNP KEADWFYAPV 120 YTTCDLTPAG LPLPFKSPRV MRSAIQYISN KWPFWNKTDG ADHFFVVPHD FGACFHYQEE 180 KAIERGILPL LQRATLVQTF GQENHVCLKE GSIIIPPFAP PQKMQAHLIP PDTPRSIFVY 240 FRGLFYDTGN DPEGGYYARG ARASLWENFK NNPLFDISTE HPATYYEDMQ RAVFCLCPLG 300 WAPWSPRLVE AVVFGCIPVI IADDIVLPFA DAIPWEEIGV FIEEKDVPKL DTILTSMPIE 360 DILRKQRLLA NPSMKQAMLF PQPAQARDAF HQILNGLARK LPHPEGVYLP PGEKHLNWTA 420 GPVGDLKPW* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-86 | 62 | 357 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84255.1 | 0 | 1 | 429 | 1 | 427 | unknown [Zea mays] |
RefSeq | NP_001052673.1 | 0 | 32 | 429 | 23 | 420 | Os04g0398600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149267.1 | 0 | 36 | 429 | 34 | 427 | secondary cell wall-related glycosyltransferase family 47 [Zea mays] |
RefSeq | XP_002446363.1 | 0 | 38 | 429 | 39 | 430 | hypothetical protein SORBIDRAFT_06g014730 [Sorghum bicolor] |
RefSeq | XP_002452172.1 | 0 | 7 | 429 | 8 | 432 | hypothetical protein SORBIDRAFT_04g021180 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |