y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_010254m |
Family | GT47 |
Protein Properties | Length: 365 Molecular Weight: 42404.9 Isoelectric Point: 6.9963 |
Chromosome | Chromosome/Scaffold: 07046 Start: 64425 End: 67979 |
Description | exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 23 | 271 | 0 |
LEYYRKAYDHIVEHHSYWNRSSGRDHIWFFSWDEGACYAPKEIWNSMMLVHWGNTNSKHNHSTTAYWADNWDKIPSDKRGTHPCFDPDKDLVLPAWKRPD TSALSTKLWDRPLDKRKTLFYFNGNLGPAYPNGRPEASYSMGIRQKLAEEFGSSPTKNGTLGKQHAQDVIVTPDRSQNYHEDLASSVFCGVLPGDGWSGR MEDSILQGCIPVVIQDGIFLPYENVLNYESFAVRIREDEIPNLIKILRG |
Full Sequence |
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Protein Sequence Length: 365 Download |
MLILLLLLLA NQEHKGLRSS LTLEYYRKAY DHIVEHHSYW NRSSGRDHIW FFSWDEGACY 60 APKEIWNSMM LVHWGNTNSK HNHSTTAYWA DNWDKIPSDK RGTHPCFDPD KDLVLPAWKR 120 PDTSALSTKL WDRPLDKRKT LFYFNGNLGP AYPNGRPEAS YSMGIRQKLA EEFGSSPTKN 180 GTLGKQHAQD VIVTPDRSQN YHEDLASSVF CGVLPGDGWS GRMEDSILQG CIPVVIQDGI 240 FLPYENVLNY ESFAVRIRED EIPNLIKILR GFNDTEKAFK LANVQKIWQR FLYRDNVLLE 300 AERQKTAFSR AEDWAVEFLQ LVEDDVFTTF VQVLHYKLHN DPWRRQLSYL KKDFRLPQEC 360 LGTN* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-51 | 24 | 272 | 250 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80640.1 | 0 | 9 | 354 | 454 | 808 | hypothetical protein [Vitis vinifera] |
EMBL | CBI29877.1 | 0 | 9 | 361 | 466 | 818 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277596.1 | 0 | 9 | 361 | 438 | 790 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002308967.1 | 0 | 9 | 361 | 437 | 789 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526728.1 | 0 | 9 | 364 | 373 | 728 | catalytic, putative [Ricinus communis] |